RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 RGS3P49796 1198 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 MECOMQ03112 1051 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 TCP10Q12799 353 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 TAF1CQ15572 869 aaPredicted RBP10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 DIEXFQ68CQ4 756 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 C17orf99Q6UX52 265 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 ANKRD23Q86SG2 305 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 CD99L2Q8TCZ2 262 aa10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 DDX4Q9NQI0 724 aaKnown RBP10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 COL2A1P02458 1487 aaPredicted RBP10.35□□□□□ -0.75
SMARCB1-207ENST00000491967 MROH7-TTC4A0A0A0MT08 1334 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 ZBED9Q6R2W3 1325 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 GNRH1P01148 92 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 UQCRFS1P1P0C7P4 283 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 MCAMP43121 646 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 G3BP1Q13283 466 aaKnown RBP eCLIP10.34□□□□□ -0.758e-6■□□□□ 9
SMARCB1-207ENST00000491967 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 EFCC1Q9HA90 598 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 MYO5AQ9Y4I1 1855 aaKnown RBP10.34□□□□□ -0.75
SMARCB1-207ENST00000491967 CENPFP49454 3210 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 DDTLA6NHG4 134 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 CTNND1O60716 968 aaKnown RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 LDHCP07864 332 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 BTDP43251 543 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 PPP4CP60510 307 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 LACTBP83111 547 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 GPAT2Q6NUI2 795 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 DZIP1Q86YF9 867 aaKnown RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 SCYL3Q8IZE3 742 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 NEUROD6Q96NK8 337 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 AFG3L2Q9Y4W6 797 aa10.33□□□□□ -0.76
SMARCB1-207ENST00000491967 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 PTPRAP18433 802 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 GSTO1P78417 241 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 ARHGEF6Q15052 776 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 METTL16Q86W50 562 aaKnown RBP10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 SLC45A1Q9Y2W3 748 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 FOCADQ5VW36 1801 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 DOCK1Q14185 1865 aa10.32□□□□□ -0.76
SMARCB1-207ENST00000491967 ZSWIM8A7E2V4 1837 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 A0A0G2JLL6 359 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 PDHXO00330 501 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 CTGFP29279 349 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 PRMT2P55345 433 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 PRRT2Q7Z6L0 340 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 ZNF333Q96JL9 665 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 DBNDD2Q9BQY9 259 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 ARHGAP39Q9C0H5 1083 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 ZHX2Q9Y6X8 837 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 DOCK3Q8IZD9 2030 aa10.31□□□□□ -0.76
SMARCB1-207ENST00000491967 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 MGAMO43451 1857 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 MKI67P46013 3256 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 POTEFA5A3E0 1075 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 SURF6O75683 361 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 SLURP2P0DP57 97 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 BCRP11274 1271 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 GORABQ5T7V8 394 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 CEP85Q6P2H3 762 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 FASTKD5Q7L8L6 764 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 EAF2Q96CJ1 260 aaPredicted RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 OSBPL5Q9H0X9 879 aaPredicted RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 DBNLQ9UJU6 430 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 PTCH2Q9Y6C5 1203 aa10.3□□□□□ -0.76
SMARCB1-207ENST00000491967 MAST2Q6P0Q8 1798 aa10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 RRP1BQ14684 758 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 CCDC158Q5M9N0 1113 aa10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 TMED8Q6PL24 325 aaPredicted RBP10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 FTSJ3Q8IY81 847 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 RAI14Q9P0K7 980 aa10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
SMARCB1-207ENST00000491967 ATAD5Q96QE3 1844 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 BRCA2P51587 3418 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 PLCG2P16885 1265 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 PICALMQ13492 652 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 ZSCAN29Q8IWY8 852 aaPredicted RBP10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 SH3RF3Q8TEJ3 882 aaPredicted RBP10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 TRIM47Q96LD4 638 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 TBC1D2Q9BYX2 928 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 DHX36Q9H2U1 1008 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 PIH1D3Q9NQM4 214 aaKnown RBP10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 PICK1Q9NRD5 415 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 SNRKQ9NRH2 765 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 PI4KBQ9UBF8 816 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 CPA4Q9UI42 421 aa10.28□□□□□ -0.76
SMARCB1-207ENST00000491967 HERC5Q9UII4 1024 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms