RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 CA12O43570 354 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 PDE6AP16499 860 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 PLCG2P16885 1265 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 MX1P20591 662 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 SLC9C2Q5TAH2 1124 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 B4GALNT3Q6L9W6 998 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 ANKRD13AQ8IZ07 590 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 ZIC5Q96T25 663 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 FOCADQ5VW36 1801 aa28.2■■■□□ 2.1
CPNE9-204ENST00000491802 SALL3Q9BXA9 1300 aa28.19■■■□□ 2.1
CPNE9-204ENST00000491802 PPP4CP60510 307 aa28.19■■■□□ 2.1
CPNE9-204ENST00000491802 MIGA1Q8NAN2 632 aa28.19■■■□□ 2.1
CPNE9-204ENST00000491802 LNPKQ9C0E8 428 aa28.19■■■□□ 2.1
CPNE9-204ENST00000491802 CDK5RAP2Q96SN8 1893 aa28.19■■■□□ 2.1
CPNE9-204ENST00000491802 FOXN1O15353 648 aa28.18■■■□□ 2.1
CPNE9-204ENST00000491802 DYNLL1P63167 89 aaKnown RBP28.18■■■□□ 2.1
CPNE9-204ENST00000491802 KIF23Q02241 960 aaPredicted RBP28.18■■■□□ 2.1
CPNE9-204ENST00000491802 COL2A1P02458 1487 aaPredicted RBP28.18■■■□□ 2.1
CPNE9-204ENST00000491802 ERC2O15083 957 aa28.17■■■□□ 2.1
CPNE9-204ENST00000491802 CTCFP49711 727 aaPredicted RBP28.17■■■□□ 2.1
CPNE9-204ENST00000491802 DCAF15Q66K64 600 aa28.17■■■□□ 2.1
CPNE9-204ENST00000491802 ZSCAN29Q8IWY8 852 aaPredicted RBP28.17■■■□□ 2.1
CPNE9-204ENST00000491802 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.17■■■□□ 2.1
CPNE9-204ENST00000491802 PI4K2BQ8TCG2 481 aa28.17■■■□□ 2.1
CPNE9-204ENST00000491802 BEGAINQ9BUH8 593 aa28.17■■■□□ 2.1
CPNE9-204ENST00000491802 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.17■■■□□ 2.1
CPNE9-204ENST00000491802 ZNF532Q9HCE3 1301 aa28.17■■■□□ 2.1
CPNE9-204ENST00000491802 GLRX3O76003 335 aaKnown RBP28.16■■■□□ 2.1
CPNE9-204ENST00000491802 ZBTB48P10074 688 aaPredicted RBP28.16■■■□□ 2.1
CPNE9-204ENST00000491802 CSRNP1Q96S65 589 aa28.16■■■□□ 2.1
CPNE9-204ENST00000491802 ATRNL1Q5VV63 1379 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 SPRYD7Q5W111 196 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 SH3BP5LQ7L8J4 393 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 CERS3Q8IU89 383 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 SLC10A4Q96EP9 437 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 CLMNQ96JQ2 1002 aa28.15■■■□□ 2.1
CPNE9-204ENST00000491802 OSBPL5Q9H0X9 879 aaPredicted RBP28.15■■■□□ 2.1
CPNE9-204ENST00000491802 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.15■■■□□ 2.1
CPNE9-204ENST00000491802 TCRBV5S4A2TA0A5A2 114 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 ADD2P35612 726 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 MAP3K9P80192 1104 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 NUCB1Q02818 461 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.14■■■□□ 2.1
CPNE9-204ENST00000491802 MIGA2Q7L4E1 593 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 CHD1LQ86WJ1 897 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 TGFBRAP1Q8WUH2 860 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 SAGE1Q9NXZ1 904 aa28.14■■■□□ 2.1
CPNE9-204ENST00000491802 DDTLA6NHG4 134 aaPredicted RBP28.13■■■□□ 2.09
CPNE9-204ENST00000491802 WRNIP1Q96S55 665 aa28.13■■■□□ 2.09
CPNE9-204ENST00000491802 ZNF341Q9BYN7 854 aa28.13■■■□□ 2.09
CPNE9-204ENST00000491802 PRDM10Q9NQV6 1147 aa28.13■■■□□ 2.09
CPNE9-204ENST00000491802 FLT1P17948 1338 aa28.13■■■□□ 2.09
CPNE9-204ENST00000491802 MYH7P12883 1935 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 MAGEB6P1A0A0J9YX57 407 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 TM4SF4P48230 202 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 MAP3K10Q02779 954 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 SLFNL1Q499Z3 407 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 MAPKAPK5Q8IW41 473 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 KBTBD3Q8NAB2 608 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 WNK4Q96J92 1243 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 RIOK1Q9BRS2 568 aaKnown RBP28.12■■■□□ 2.09
CPNE9-204ENST00000491802 ZNF112Q9UJU3 913 aa28.12■■■□□ 2.09
CPNE9-204ENST00000491802 HSPA8P11142 646 aaKnown RBP28.11■■■□□ 2.09
CPNE9-204ENST00000491802 PDE1AP54750 535 aa28.11■■■□□ 2.09
CPNE9-204ENST00000491802 STAP2Q9UGK3 403 aa28.11■■■□□ 2.09
CPNE9-204ENST00000491802 CHGBP05060 677 aa28.1■■■□□ 2.09
CPNE9-204ENST00000491802 MKRN3Q13064 507 aaKnown RBP28.1■■■□□ 2.09
CPNE9-204ENST00000491802 VGLL4Q14135 290 aa28.1■■■□□ 2.09
CPNE9-204ENST00000491802 ZSCAN25Q6NSZ9 544 aa28.1■■■□□ 2.09
CPNE9-204ENST00000491802 CSADQ9Y600 493 aa28.1■■■□□ 2.09
CPNE9-204ENST00000491802 INHBEP58166 350 aa28.09■■■□□ 2.09
CPNE9-204ENST00000491802 SREBF2Q12772 1141 aa28.09■■■□□ 2.09
CPNE9-204ENST00000491802 ELP3Q9H9T3 547 aa28.09■■■□□ 2.09
CPNE9-204ENST00000491802 MANSC4A6NHS7 340 aaPredicted RBP28.08■■■□□ 2.09
CPNE9-204ENST00000491802 USP5P45974 858 aa28.08■■■□□ 2.09
CPNE9-204ENST00000491802 UBE3CQ15386 1083 aa28.08■■■□□ 2.09
CPNE9-204ENST00000491802 TBC1D12O60347 775 aa28.07■■■□□ 2.08
CPNE9-204ENST00000491802 LCORLQ8N3X6 602 aa28.07■■■□□ 2.08
CPNE9-204ENST00000491802 SPDYE5A6NIY4 337 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 MBD4O95243 580 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 SLURP2P0DP57 97 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 INPP5BP32019 993 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 NOL9Q5SY16 702 aaKnown RBP28.06■■■□□ 2.08
CPNE9-204ENST00000491802 ZKSCAN4Q969J2 545 aaPredicted RBP28.06■■■□□ 2.08
CPNE9-204ENST00000491802 CRNKL1Q9BZJ0 848 aaKnown RBP28.06■■■□□ 2.08
CPNE9-204ENST00000491802 ARMT1Q9H993 441 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 SAP30BPQ9UHR5 308 aaKnown RBP28.06■■■□□ 2.08
CPNE9-204ENST00000491802 SNCAIPQ9Y6H5 919 aa28.06■■■□□ 2.08
CPNE9-204ENST00000491802 GJA5P36382 358 aa28.05■■■□□ 2.08
CPNE9-204ENST00000491802 OPTNQ96CV9 577 aa28.05■■■□□ 2.08
CPNE9-204ENST00000491802 FSD1Q9BTV5 496 aa28.05■■■□□ 2.08
CPNE9-204ENST00000491802 DHX36Q9H2U1 1008 aaKnown RBP28.05■■■□□ 2.08
CPNE9-204ENST00000491802 RNF186Q9NXI6 227 aa28.05■■■□□ 2.08
CPNE9-204ENST00000491802 SIPA1L1O43166 1804 aa28.04■■■□□ 2.08
CPNE9-204ENST00000491802 TESPA1A2RU30 521 aaPredicted RBP28.04■■■□□ 2.08
CPNE9-204ENST00000491802 FAM196BA6NMK8 535 aa28.04■■■□□ 2.08
CPNE9-204ENST00000491802 CENPBP07199 599 aaPredicted RBP28.04■■■□□ 2.08
CPNE9-204ENST00000491802 LBX1P52954 281 aa28.04■■■□□ 2.08
CPNE9-204ENST00000491802 ERO1BQ86YB8 467 aa28.04■■■□□ 2.08
CPNE9-204ENST00000491802 CFHR5Q9BXR6 569 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms