RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 TMPRSS13Q9BYE2 586 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 MIR1-1HGQ9H1L0 117 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 AKTIPQ9H8T0 292 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 PCDHB5Q9Y5E4 795 aa6.57□□□□□ -1.36
RTN4-215ENST00000491592 HYAL3O43820 417 aaPredicted RBP6.56□□□□□ -1.36
RTN4-215ENST00000491592 ZNF862O60290 1169 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 LIG1P18858 919 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 ERCC5P28715 1186 aaPredicted RBP6.56□□□□□ -1.36
RTN4-215ENST00000491592 LMNB2Q03252 620 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 FAM160A1Q05DH4 1040 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 SNAP47Q5SQN1 464 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 Q6ZS46 218 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 TRIM42Q8IWZ5 723 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 TMEM130Q8N3G9 435 aa6.56□□□□□ -1.36
RTN4-215ENST00000491592 WDR89Q96FK6 387 aaPredicted RBP6.56□□□□□ -1.36
RTN4-215ENST00000491592 MEGF11A6BM72 1044 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 MINDY4BA8MYZ0 360 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 AOC2O75106 756 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 ALX3O95076 343 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 PF4P02776 101 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 GLB1P16278 677 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 NOS3P29474 1203 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 CAMK2GQ13555 558 aaPredicted RBP6.55□□□□□ -1.36
RTN4-215ENST00000491592 EXOSC6Q5RKV6 272 aaKnown RBP6.55□□□□□ -1.36
RTN4-215ENST00000491592 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 ANKRD34AQ69YU3 496 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 FDX2Q6P4F2 183 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 TGIF2Q9GZN2 237 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 SUGCTQ9HAC7 445 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 DDX41Q9UJV9 622 aaKnown RBP6.55□□□□□ -1.36
RTN4-215ENST00000491592 AP4E1Q9UPM8 1137 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 PCDHGC5Q9Y5F6 944 aa6.55□□□□□ -1.36
RTN4-215ENST00000491592 ADH5P11766 374 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 GARTP22102 1010 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 EIF4A3P38919 411 aaKnown RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 IREB2P48200 963 aaKnown RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 RACK1P63244 317 aaKnown RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 AKAP4Q5JQC9 854 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 SMG8Q8ND04 991 aaKnown RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 SSBP4Q9BWG4 385 aaPredicted RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 CEP41Q9BYV8 373 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 KCNQ5Q9NR82 932 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 ADAMTS1Q9UHI8 967 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
RTN4-215ENST00000491592 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.54□□□□□ -1.36
RTN4-215ENST00000491592 TMPRSS2O15393 492 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 TIAF1O95411 115 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 PREPP48147 710 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
RTN4-215ENST00000491592 BNC2Q6ZN30 1099 aaPredicted RBP6.53□□□□□ -1.36
RTN4-215ENST00000491592 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 ZNF654Q8IZM8 581 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 MEGF10Q96KG7 1140 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 RAD18Q9NS91 495 aa6.53□□□□□ -1.36
RTN4-215ENST00000491592 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
RTN4-215ENST00000491592 SYNGAP1Q96PV0 1343 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 F13A1P00488 732 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 ID3Q02535 119 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 WIPI1Q5MNZ9 446 aaPredicted RBP6.52□□□□□ -1.37
RTN4-215ENST00000491592 FBXL19Q6PCT2 694 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 CCDC84Q86UT8 332 aaPredicted RBP6.52□□□□□ -1.37
RTN4-215ENST00000491592 SPON2Q9BUD6 331 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
RTN4-215ENST00000491592 BPNT1O95861 308 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 UVSSAQ2YD98 709 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
RTN4-215ENST00000491592 FAM196AQ6ZSG2 479 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.51□□□□□ -1.37
RTN4-215ENST00000491592 SLC51AQ86UW1 340 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 ZNF296Q8WUU4 475 aaPredicted RBP6.51□□□□□ -1.37
RTN4-215ENST00000491592 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 JARID2Q92833 1246 aaPredicted RBP6.51□□□□□ -1.37
RTN4-215ENST00000491592 KRTAP4-12Q9BQ66 201 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 ACBD3Q9H3P7 528 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 PPP1R9AQ9ULJ8 1098 aa6.51□□□□□ -1.37
RTN4-215ENST00000491592 FAM221AA4D161 298 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 GAS2O43903 313 aaKnown RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 CILPO75339 1184 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 SLFN14P0C7P3 912 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 DRD2P14416 443 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 RPL6Q02878 288 aaKnown RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 SOX4Q06945 474 aaPredicted RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 PAK2Q13177 524 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 ZC3H12AQ5D1E8 599 aaKnown RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 LRFN4Q6PJG9 635 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 C12orf50Q8NA57 414 aaPredicted RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
RTN4-215ENST00000491592 ELMO3Q96BJ8 720 aa6.5□□□□□ -1.37
RTN4-215ENST00000491592 PLPPR2Q96GM1 343 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms