RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 APPBP2Q92624 585 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 ZNF333Q96JL9 665 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 MPHOSPH8Q99549 860 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 LMBRD1Q9NUN5 540 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 ZNRF3Q9ULT6 936 aa14.14□□□□□ -0.15
SRGAP3-210ENST00000491467 TMEM265A0A087WTH1 108 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 FSD2A1L4K1 749 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 GOLGA6L3A6NEY3 463 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 MKRN3Q13064 507 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 SLC10A5Q5PT55 438 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 FBXL16Q8N461 479 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 CFHR5Q9BXR6 569 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 NYXQ9GZU5 481 aa14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
SRGAP3-210ENST00000491467 MYH13Q9UKX3 1938 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 MBD3O95983 291 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 HSPD1P10809 573 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 SREBF2Q12772 1141 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 TNIP1Q15025 636 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 SF3B3Q15393 1217 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 NOL8Q76FK4 1167 aaKnown RBP14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 SAMD7Q7Z3H4 446 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 MICALL2Q8IY33 904 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 ERO1AQ96HE7 468 aa14.12□□□□□ -0.15
SRGAP3-210ENST00000491467 KLRG2A4D1S0 409 aaPredicted RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 STX6O43752 255 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 RAD17O75943 681 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 CYP21A2P08686 494 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 ADORA1P30542 326 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 PKP1Q13835 747 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 UBE3CQ15386 1083 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 CSPP1Q1MSJ5 1256 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 TBC1D10BQ4KMP7 808 aaPredicted RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 RBM26Q5T8P6 1007 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 DHX32Q7L7V1 743 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 SYMPKQ92797 1274 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 CCDC85AQ96PX6 553 aaPredicted RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 SEC62Q99442 399 aaKnown RBP14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 HTATIP2Q9BUP3 242 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 EFCC1Q9HA90 598 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 MAST3O60307 1309 aa14.11□□□□□ -0.15
SRGAP3-210ENST00000491467 MYH15Q9Y2K3 1946 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 ZAP70P43403 619 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 MRE11P49959 708 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 ME3Q16798 604 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 SLC9C1Q4G0N8 1177 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 GRIPAP1Q4V328 841 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 CCDC102BQ68D86 513 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 SULF1Q8IWU6 871 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 CDCA5Q96FF9 252 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 AGXT2Q9BYV1 514 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 NDUFB9Q9Y6M9 179 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 WDR19Q8NEZ3 1342 aa14.1□□□□□ -0.15
SRGAP3-210ENST00000491467 ZBTB22O15209 634 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 CPA1P15085 419 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 SYT1P21579 422 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 GJB2P29033 226 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 ADD2P35612 726 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 MCAMP43121 646 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 TOB2Q14106 344 aaPredicted RBP14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 IMMTQ16891 758 aaKnown RBP14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 CCDC129Q6ZRS4 1044 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 CCDC83Q8IWF9 413 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 TMEM87AQ8NBN3 555 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 TPCN1Q9ULQ1 816 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 RPTORQ8N122 1335 aa14.09□□□□□ -0.15
SRGAP3-210ENST00000491467 FAM177BA6PVY3 158 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 IGSF3O75054 1194 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 EXOSC10Q01780 885 aaKnown RBP14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 UBE4AQ14139 1066 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 ALX1Q15699 326 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 WASHC4Q2M389 1173 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 TPTE2Q6XPS3 522 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 OSBP2Q969R2 916 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 KIF3AQ9Y496 699 aa14.08□□□□□ -0.16
SRGAP3-210ENST00000491467 E7EWF7 191 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 UBE2Q2LH0YL09 131 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 M0R2C6 588 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 ALDH1A1P00352 501 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 F13A1P00488 732 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 ZNF445P59923 1031 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 FKBP1BP68106 108 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 MAP3K12Q12852 859 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 MOB2Q70IA6 237 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 ANKRD18AQ8IVF6 992 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 RGS22Q8NE09 1264 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 ZNF274Q96GC6 653 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 BSDC1Q9NW68 430 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 ZMYM6O95789 1325 aa14.07□□□□□ -0.16
SRGAP3-210ENST00000491467 TAF1P21675 1872 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms