RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 LDHCP07864 332 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 SP3Q02447 781 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 PICALMQ13492 652 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 NOL9Q5SY16 702 aaKnown RBP10.15□□□□□ -0.78
LSM2-213ENST00000491421 CD99L2Q8TCZ2 262 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 ZNF384Q8TF68 577 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 NSUN4Q96CB9 384 aaKnown RBP10.15□□□□□ -0.78
LSM2-213ENST00000491421 DBNDD2Q9BQY9 259 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 ZFYVE28Q9HCC9 887 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 DDX4Q9NQI0 724 aaKnown RBP10.15□□□□□ -0.78
LSM2-213ENST00000491421 LRP2BPQ9P2M1 347 aa10.15□□□□□ -0.78
LSM2-213ENST00000491421 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
LSM2-213ENST00000491421 ATRNL1Q5VV63 1379 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 BTBD19C9JJ37 291 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 MS4A1P11836 297 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 RHBDL3P58872 404 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 CEP85Q6P2H3 762 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 OTOP1Q7RTM1 612 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.14□□□□□ -0.79
LSM2-213ENST00000491421 ZCCHC17Q9NP64 241 aaKnown RBP10.14□□□□□ -0.79
LSM2-213ENST00000491421 SNRKQ9NRH2 765 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 LAMB1P07942 1786 aa10.14□□□□□ -0.79
LSM2-213ENST00000491421 DDTLA6NHG4 134 aaPredicted RBP10.13□□□□□ -0.79
LSM2-213ENST00000491421 MAP4K4O95819 1239 aaPredicted RBP10.13□□□□□ -0.79
LSM2-213ENST00000491421 SCYL3Q8IZE3 742 aa10.13□□□□□ -0.79
LSM2-213ENST00000491421 ZNF512BQ96KM6 892 aaPredicted RBP10.13□□□□□ -0.79
LSM2-213ENST00000491421 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
LSM2-213ENST00000491421 EFCC1Q9HA90 598 aa10.13□□□□□ -0.79
LSM2-213ENST00000491421 PICK1Q9NRD5 415 aa10.13□□□□□ -0.79
LSM2-213ENST00000491421 TLR7Q9NYK1 1049 aaKnown RBP10.13□□□□□ -0.79
LSM2-213ENST00000491421 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
LSM2-213ENST00000491421 HTTP42858 3142 aa10.13□□□□□ -0.79
LSM2-213ENST00000491421 PHF20L1A8MW92 1017 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 TLR2O60603 784 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 NPM3O75607 178 aaKnown RBP10.12□□□□□ -0.79
LSM2-213ENST00000491421 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 NAA16Q6N069 864 aaPredicted RBP10.12□□□□□ -0.79
LSM2-213ENST00000491421 ANKRD23Q86SG2 305 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 ERC1Q8IUD2 1116 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 TEX11Q8IYF3 940 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 EAF2Q96CJ1 260 aaPredicted RBP10.12□□□□□ -0.79
LSM2-213ENST00000491421 CCDC8Q9H0W5 538 aaPredicted RBP10.12□□□□□ -0.79
LSM2-213ENST00000491421 DBNLQ9UJU6 430 aaKnown RBP10.12□□□□□ -0.79
LSM2-213ENST00000491421 EXOC6BQ9Y2D4 811 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 PTPN22Q9Y2R2 807 aa10.12□□□□□ -0.79
LSM2-213ENST00000491421 PDHXO00330 501 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
LSM2-213ENST00000491421 BAG3O95817 575 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 CYP2E1P05181 493 aaPredicted RBP10.11□□□□□ -0.79
LSM2-213ENST00000491421 SLURP2P0DP57 97 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 PTPRAP18433 802 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 ZAP70P43403 619 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 MAP3K10Q02779 954 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 KIF22Q14807 665 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 HSP90AB4PQ58FF6 505 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 SH3RF3Q8TEJ3 882 aaPredicted RBP10.11□□□□□ -0.79
LSM2-213ENST00000491421 OSBPL5Q9H0X9 879 aaPredicted RBP10.11□□□□□ -0.79
LSM2-213ENST00000491421 PIH1D3Q9NQM4 214 aaKnown RBP10.11□□□□□ -0.79
LSM2-213ENST00000491421 AATFQ9NY61 560 aaKnown RBP eCLIP10.11□□□□□ -0.79
LSM2-213ENST00000491421 RCAN3Q9UKA8 241 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 DDX19BQ9UMR2 479 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 COG6Q9Y2V7 657 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 ZHX2Q9Y6X8 837 aa10.11□□□□□ -0.79
LSM2-213ENST00000491421 CXCL11O14625 94 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 TBC1D12O60347 775 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 IGSF3O75054 1194 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 PLCG2P16885 1265 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 CAP1Q01518 475 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 MOGSQ13724 837 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 AACSQ86V21 672 aa10.1□□□□□ -0.79
LSM2-213ENST00000491421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.1□□□□□ -0.79
LSM2-213ENST00000491421 COL2A1P02458 1487 aaPredicted RBP10.1□□□□□ -0.79
LSM2-213ENST00000491421 MYH2Q9UKX2 1941 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 A0A0G2JLL6 359 aaPredicted RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 TRIM75PA6NK02 468 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 FAM196BA6NMK8 535 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 HMMRO75330 724 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 IDH1O75874 414 aaKnown RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 LACTBP83111 547 aaPredicted RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 FASTKD5Q7L8L6 764 aaKnown RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 PRRT2Q7Z6L0 340 aaPredicted RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 ADGRA1Q86SQ6 560 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 PARK7Q99497 189 aaKnown RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 ARHGAP39Q9C0H5 1083 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 CHMP4BQ9H444 224 aaKnown RBP10.09□□□□□ -0.79
LSM2-213ENST00000491421 IL1RAPL2Q9NP60 686 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 ZBTB40Q9NUA8 1239 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 CPA4Q9UI42 421 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 AFG3L2Q9Y4W6 797 aa10.09□□□□□ -0.79
LSM2-213ENST00000491421 APBB1O00213 710 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 CYP7A1P22680 504 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 PPP4CP60510 307 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 GPAT2Q6NUI2 795 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 C17orf99Q6UX52 265 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 GADL1Q6ZQY3 521 aa10.08□□□□□ -0.8
LSM2-213ENST00000491421 CCDC84Q86UT8 332 aaPredicted RBP10.08□□□□□ -0.8
LSM2-213ENST00000491421 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms