RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 GPATCH3Q96I76 525 aa19.49■□□□□ 0.71
PFDN6-207ENST00000491382 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
PFDN6-207ENST00000491382 ANTXR1Q9H6X2 564 aa19.49■□□□□ 0.71
PFDN6-207ENST00000491382 ELP3Q9H9T3 547 aa19.49■□□□□ 0.71
PFDN6-207ENST00000491382 AATFQ9NY61 560 aaKnown RBP eCLIP19.49■□□□□ 0.71
PFDN6-207ENST00000491382 FOCADQ5VW36 1801 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 CDK5RAP2Q96SN8 1893 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 MANSC4A6NHS7 340 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-207ENST00000491382 SMARCA5O60264 1052 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-207ENST00000491382 ATP5JP18859 108 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 CYP7A1P22680 504 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 MIGA2Q7L4E1 593 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 MAGEB6Q8N7X4 407 aa19.48■□□□□ 0.71
PFDN6-207ENST00000491382 DDX4Q9NQI0 724 aaKnown RBP19.48■□□□□ 0.71
PFDN6-207ENST00000491382 COL2A1P02458 1487 aaPredicted RBP19.48■□□□□ 0.71
PFDN6-207ENST00000491382 ATRNL1Q5VV63 1379 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 GOLIM4O00461 696 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 TM4SF4P48230 202 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 INHBEP58166 350 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 PPP4CP60510 307 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 COL13A1Q5TAT6 717 aaPredicted RBP19.47■□□□□ 0.71
PFDN6-207ENST00000491382 ZFPM1Q8IX07 1006 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 OPTNQ96CV9 577 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 RNF186Q9NXI6 227 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 ZBTB47Q9UFB7 747 aaPredicted RBP19.47■□□□□ 0.71
PFDN6-207ENST00000491382 TSKSQ9UJT2 592 aa19.47■□□□□ 0.71
PFDN6-207ENST00000491382 ADGRA1Q86SQ6 560 aa19.46■□□□□ 0.71
PFDN6-207ENST00000491382 SH3RF3Q8TEJ3 882 aaPredicted RBP19.46■□□□□ 0.71
PFDN6-207ENST00000491382 BOLA2Q9H3K6 86 aa19.46■□□□□ 0.71
PFDN6-207ENST00000491382 PAG1Q9NWQ8 432 aa19.46■□□□□ 0.71
PFDN6-207ENST00000491382 SUPT16HQ9Y5B9 1047 aaKnown RBP19.46■□□□□ 0.71
PFDN6-207ENST00000491382 TRPA1O75762 1119 aa19.45■□□□□ 0.7
PFDN6-207ENST00000491382 ZKSCAN4Q969J2 545 aaPredicted RBP19.45■□□□□ 0.7
PFDN6-207ENST00000491382 HAUS7Q99871 368 aa19.45■□□□□ 0.7
PFDN6-207ENST00000491382 OSBPL5Q9H0X9 879 aaPredicted RBP19.45■□□□□ 0.7
PFDN6-207ENST00000491382 ECHDC1Q9NTX5 307 aa19.45■□□□□ 0.7
PFDN6-207ENST00000491382 MYH7P12883 1935 aa19.45■□□□□ 0.7
PFDN6-207ENST00000491382 DDTLA6NHG4 134 aaPredicted RBP19.44■□□□□ 0.7
PFDN6-207ENST00000491382 SPDYE5A6NIY4 337 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 ALDH1A1P00352 501 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
PFDN6-207ENST00000491382 SLC9C2Q5TAH2 1124 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 SH3BP5LQ7L8J4 393 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 ERO1BQ86YB8 467 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 OTUD5Q96G74 571 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 ZNF112Q9UJU3 913 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 SNCAIPQ9Y6H5 919 aa19.44■□□□□ 0.7
PFDN6-207ENST00000491382 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
PFDN6-207ENST00000491382 GCC1Q96CN9 775 aa19.43■□□□□ 0.7
PFDN6-207ENST00000491382 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.43■□□□□ 0.71e-6■□□□□ 10.6
PFDN6-207ENST00000491382 DHX36Q9H2U1 1008 aaKnown RBP19.43■□□□□ 0.7
PFDN6-207ENST00000491382 DOCK1Q14185 1865 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 PDE6AP16499 860 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 INPP5BP32019 993 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 GJA5P36382 358 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 GTF2A2P52657 109 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 OTUD7BQ6GQQ9 843 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 TGFBRAP1Q8WUH2 860 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 FLT1P17948 1338 aa19.42■□□□□ 0.7
PFDN6-207ENST00000491382 TBC1D12O60347 775 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 DYNLL1P63167 89 aaKnown RBP19.41■□□□□ 0.7
PFDN6-207ENST00000491382 MAP3K10Q02779 954 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 PPATQ06203 517 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 NOL9Q5SY16 702 aaKnown RBP19.41■□□□□ 0.7
PFDN6-207ENST00000491382 IFNL1Q8IU54 200 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 MAPKAPK5Q8IW41 473 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 TNS4Q8IZW8 715 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 MYH1P12882 1939 aa19.41■□□□□ 0.7
PFDN6-207ENST00000491382 MAGEB6P1A0A0J9YX57 407 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 USP5P45974 858 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 PPIL2Q13356 520 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 ZSCAN25Q6NSZ9 544 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 EXOC6Q8TAG9 804 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 CNKSR2Q8WXI2 1034 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 EDC3Q96F86 508 aaKnown RBP19.4■□□□□ 0.7
PFDN6-207ENST00000491382 RWDD1Q9H446 243 aaPredicted RBP19.4■□□□□ 0.7
PFDN6-207ENST00000491382 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.4■□□□□ 0.7
PFDN6-207ENST00000491382 PI4KBQ9UBF8 816 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 HERC5Q9UII4 1024 aaKnown RBP19.4■□□□□ 0.7
PFDN6-207ENST00000491382 TTC41PQ6P2S7 1318 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
PFDN6-207ENST00000491382 TESPA1A2RU30 521 aaPredicted RBP19.39■□□□□ 0.69
PFDN6-207ENST00000491382 ERC2O15083 957 aa19.39■□□□□ 0.69
PFDN6-207ENST00000491382 ANKRD45Q5TZF3 282 aa19.39■□□□□ 0.69
PFDN6-207ENST00000491382 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
PFDN6-207ENST00000491382 PICK1Q9NRD5 415 aa19.39■□□□□ 0.69
PFDN6-207ENST00000491382 CASP8AP2Q9UKL3 1982 aa19.39■□□□□ 0.69
PFDN6-207ENST00000491382 CCL15-CCL14A0A0B4J2E2 113 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 PHF20L1A8MW92 1017 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 SIPA1L1O43166 1804 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 CTNND1O60716 968 aaKnown RBP19.38■□□□□ 0.69
PFDN6-207ENST00000491382 HLA-DOAP06340 250 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 CETPP11597 493 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 ADD2P35612 726 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 SNAPC2Q13487 334 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 CCL15Q16663 113 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 NAV1Q8NEY1 1877 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 MS4A4AQ96JQ5 239 aa19.38■□□□□ 0.69
PFDN6-207ENST00000491382 ATAD5Q96QE3 1844 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms