RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 VAV3Q9UKW4 847 aa8.24□□□□□ -1.09
PHC3-213ENST00000491258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
PHC3-213ENST00000491258 IGHA2P01877 340 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 RNASE1P07998 156 aaKnown RBP8.23□□□□□ -1.09
PHC3-213ENST00000491258 AOC3Q16853 763 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 LCE4AQ5TA78 99 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 TOP6BLQ8N6T0 577 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 PI4K2BQ8TCG2 481 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 MBNL3Q9NUK0 354 aaKnown RBP8.23□□□□□ -1.09
PHC3-213ENST00000491258 PPP4R2Q9NY27 417 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 ADAMTS6Q9UKP5 1117 aa8.23□□□□□ -1.09
PHC3-213ENST00000491258 CEACAM5P06731 702 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 ITIH2P19823 946 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 ZNF124Q15973 351 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 ATG4DQ86TL0 474 aaPredicted RBP8.22□□□□□ -1.09
PHC3-213ENST00000491258 FAM168AQ92567 244 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 HRASLS5Q96KN8 279 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 DMRTB1Q96MA1 342 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 DUSP23Q9BVJ7 150 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 NLRP2Q9NX02 1062 aa8.22□□□□□ -1.09
PHC3-213ENST00000491258 NEFMP07197 916 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 PI16Q6UXB8 463 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 PDZD3Q86UT5 571 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.21□□□□□ -1.1
PHC3-213ENST00000491258 SULF2Q8IWU5 870 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 LRRN4CLQ8ND94 238 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 ISL2Q96A47 359 aa8.21□□□□□ -1.1
PHC3-213ENST00000491258 TMEM265A0A087WTH1 108 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 OXCT1P55809 520 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 STK35Q8TDR2 534 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 ALKBH8Q96BT7 664 aaKnown RBP8.2□□□□□ -1.1
PHC3-213ENST00000491258 BCO2Q9BYV7 579 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 MKNK2Q9HBH9 465 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 PLAGL2Q9UPG8 496 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 AKAP2Q9Y2D5 859 aa8.2□□□□□ -1.1
PHC3-213ENST00000491258 FARP2O94887 1054 aaPredicted RBP8.19□□□□□ -1.1
PHC3-213ENST00000491258 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
PHC3-213ENST00000491258 MAP1SQ66K74 1059 aaPredicted RBP8.19□□□□□ -1.1
PHC3-213ENST00000491258 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
PHC3-213ENST00000491258 RBCK1Q9BYM8 510 aa8.19□□□□□ -1.1
PHC3-213ENST00000491258 XRCC5P13010 732 aaKnown RBP8.18□□□□□ -1.1
PHC3-213ENST00000491258 ARNTP27540 789 aa8.18□□□□□ -1.1
PHC3-213ENST00000491258 RNF214Q8ND24 703 aa8.18□□□□□ -1.1
PHC3-213ENST00000491258 ACSBG1Q96GR2 724 aa8.18□□□□□ -1.1
PHC3-213ENST00000491258 CBX8Q9HC52 389 aa8.18□□□□□ -1.1
PHC3-213ENST00000491258 PKN1Q16512 942 aa8.17□□□□□ -1.1
PHC3-213ENST00000491258 ZC3H12AQ5D1E8 599 aaKnown RBP8.17□□□□□ -1.1
PHC3-213ENST00000491258 GPBAR1Q8TDU6 330 aa8.17□□□□□ -1.1
PHC3-213ENST00000491258 EMILIN2Q9BXX0 1053 aa8.17□□□□□ -1.1
PHC3-213ENST00000491258 KRTAP4-11Q9BYQ6 195 aa8.17□□□□□ -1.1
PHC3-213ENST00000491258 NME2P22392 152 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 ERVK-24P63145 666 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 KSR1Q8IVT5 923 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 CCER1Q8TC90 406 aaPredicted RBP8.16□□□□□ -1.1
PHC3-213ENST00000491258 TMEM40Q8WWA1 233 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 PICK1Q9NRD5 415 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 CSADQ9Y600 493 aa8.16□□□□□ -1.1
PHC3-213ENST00000491258 NXPE4Q6UWF7 544 aa8.15□□□□□ -1.1
PHC3-213ENST00000491258 HEXIM2Q96MH2 286 aaKnown RBP8.15□□□□□ -1.1
PHC3-213ENST00000491258 PRDM7Q9NQW5 492 aa8.15□□□□□ -1.1
PHC3-213ENST00000491258 DBX1A6NMT0 343 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 PPM1JQ5JR12 505 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 SLC23A3Q6PIS1 610 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 TMC7Q7Z402 723 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 C14orf37Q86TY3 774 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 GTF2IRD1Q9UHL9 959 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
PHC3-213ENST00000491258 ZNF252P-AS1Q0IIN9 211 aa8.13□□□□□ -1.11
PHC3-213ENST00000491258 IKZF1Q13422 519 aa8.13□□□□□ -1.11
PHC3-213ENST00000491258 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
PHC3-213ENST00000491258 MPRIPQ6WCQ1 1025 aa8.13□□□□□ -1.11
PHC3-213ENST00000491258 SLC38A3Q99624 504 aa8.13□□□□□ -1.11
PHC3-213ENST00000491258 TNKS2Q9H2K2 1166 aa8.13□□□□□ -1.11
PHC3-213ENST00000491258 BIN2Q9UBW5 565 aaPredicted RBP8.13□□□□□ -1.11
PHC3-213ENST00000491258 PNMA6FA0A0J9YX94 578 aa8.12□□□□□ -1.11
PHC3-213ENST00000491258 DCDC2CA8MYV0 355 aa8.12□□□□□ -1.11
PHC3-213ENST00000491258 ASB11Q8WXH4 323 aa8.12□□□□□ -1.11
PHC3-213ENST00000491258 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
PHC3-213ENST00000491258 SOWAHDA6NJG2 315 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 ZP2Q05996 745 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 TPTE2Q6XPS3 522 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 FAM214BQ7L5A3 538 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 UBE3DQ7Z6J8 389 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 FLAD1Q8NFF5 587 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 GRIN3AQ8TCU5 1115 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 ARID3AQ99856 593 aa8.11□□□□□ -1.11
PHC3-213ENST00000491258 LRRC10BA6NIK2 292 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 GNAT3A8MTJ3 354 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 KCNMB1Q16558 191 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 C12orf40Q86WS4 652 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 NECAB3Q96P71 396 aaPredicted RBP8.1□□□□□ -1.11
PHC3-213ENST00000491258 DCTN4Q9UJW0 460 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 SAMM50Q9Y512 469 aa8.1□□□□□ -1.11
PHC3-213ENST00000491258 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
PHC3-213ENST00000491258 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
PHC3-213ENST00000491258 CDC37L1Q7L3B6 337 aa8.09□□□□□ -1.11
PHC3-213ENST00000491258 MLANAQ16655 118 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms