RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ERO1BQ86YB8 467 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 SLC17A8Q8NDX2 589 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 TRIM47Q96LD4 638 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 WRNIP1Q96S55 665 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 API5Q9BZZ5 524 aaKnown RBP10.64□□□□□ -0.71
HPS4-215ENST00000491142 PRO3102Q9H379 93 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 ZCCHC17Q9NP64 241 aaKnown RBP10.64□□□□□ -0.71
HPS4-215ENST00000491142 CNNM1Q9NRU3 951 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 CPA4Q9UI42 421 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 A0A1B0GUL6 1792 aa10.64□□□□□ -0.71
HPS4-215ENST00000491142 PYGBP11216 843 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 OSBPP22059 807 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 TIE1P35590 1138 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 PSMC4P43686 418 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 PRMT2P55345 433 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 CCDC57Q2TAC2 916 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 TAF7LQ5H9L4 462 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 SMC5Q8IY18 1101 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 DDRGK1Q96HY6 314 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 SRRDQ9UH36 339 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 IQSEC3Q9UPP2 1182 aaPredicted RBP10.63□□□□□ -0.71
HPS4-215ENST00000491142 RIPOR2Q9Y4F9 1068 aa10.63□□□□□ -0.71
HPS4-215ENST00000491142 F6X3S4 739 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
HPS4-215ENST00000491142 CCL5P13501 91 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 GRK4P32298 578 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 GJA8P48165 433 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 PPIL2Q13356 520 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 UBE4AQ14139 1066 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 BEND3Q5T5X7 828 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 NKX2-3Q8TAU0 364 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 RAET1EQ8TD07 263 aa10.62□□□□□ -0.71
HPS4-215ENST00000491142 PUS3Q9BZE2 481 aaKnown RBP10.62□□□□□ -0.71
HPS4-215ENST00000491142 PTPRCP08575 1304 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 PDHXO00330 501 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
HPS4-215ENST00000491142 GJB1P08034 283 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 CHAF1AQ13111 956 aaPredicted RBP10.61□□□□□ -0.71
HPS4-215ENST00000491142 MIGA2Q7L4E1 593 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 HTATIP2Q9BUP3 242 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 RNF208Q9H0X6 261 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 BIN2Q9UBW5 565 aaPredicted RBP10.61□□□□□ -0.71
HPS4-215ENST00000491142 METRNQ9UJH8 293 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
HPS4-215ENST00000491142 MYPNQ86TC9 1320 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 ADGRA2Q96PE1 1338 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
HPS4-215ENST00000491142 C7P10643 843 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 HOXD10P28358 340 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 INPP5BP32019 993 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 HDLBPQ00341 1268 aaKnown RBP10.6□□□□□ -0.71
HPS4-215ENST00000491142 PPATQ06203 517 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 MOGSQ13724 837 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 GSE1Q14687 1217 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 APOBEC3HQ6NTF7 200 aaKnown RBP10.6□□□□□ -0.71
HPS4-215ENST00000491142 FBXO33Q7Z6M2 555 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 ANKRD23Q86SG2 305 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 SPOCK2Q92563 424 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 TEKT1Q969V4 418 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 NR2E3Q9Y5X4 410 aa10.6□□□□□ -0.71
HPS4-215ENST00000491142 GRM8O00222 908 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 PRKCZQ05513 592 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 FAM83AQ86UY5 434 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 U2AF1L4Q8WU68 220 aaKnown RBP10.59□□□□□ -0.71
HPS4-215ENST00000491142 LRCH3Q96II8 777 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 ZDHHC15Q96MV8 337 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 UNC93B1Q9H1C4 597 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 GABRQQ9UN88 632 aa10.59□□□□□ -0.71
HPS4-215ENST00000491142 FRAT2O75474 233 aaPredicted RBP10.58□□□□□ -0.72
HPS4-215ENST00000491142 FARP2O94887 1054 aaPredicted RBP10.58□□□□□ -0.72
HPS4-215ENST00000491142 CYP2C8P10632 490 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 UBXN2AP68543 259 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 NUCB1Q02818 461 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 DCAF15Q66K64 600 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 VPS37DQ86XT2 251 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 HOOK2Q96ED9 719 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 KAZALD1Q96I82 304 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 TMOD2Q9NZR1 351 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 STAP2Q9UGK3 403 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 KCNH4Q9UQ05 1017 aa10.58□□□□□ -0.72
HPS4-215ENST00000491142 EVI5O60447 810 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 SGPL1O95470 568 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 BCRP11274 1271 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 BCAMP50895 628 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 LRRC24Q50LG9 513 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 GPAT2Q6NUI2 795 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 TBC1D22AQ8WUA7 517 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 SUCLG2Q96I99 432 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 MRIQ9BWK5 157 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 C9orf78Q9NZ63 289 aaPredicted RBP10.57□□□□□ -0.72
HPS4-215ENST00000491142 ZNF112Q9UJU3 913 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 UNC80Q8N2C7 3258 aa10.57□□□□□ -0.72
HPS4-215ENST00000491142 A0A1W2PPC1 479 aa10.56□□□□□ -0.72
HPS4-215ENST00000491142 TFRCP02786 760 aaKnown RBP10.56□□□□□ -0.72
HPS4-215ENST00000491142 ELNP15502 786 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms