RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FAM181AQ8N9Y4 354 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 NETO1Q8TDF5 533 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 GPBAR1Q8TDU6 330 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 EZH1Q92800 747 aaPredicted RBP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 ASIC4Q96FT7 647 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 ACSS3Q9H6R3 686 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 CRIM1Q9NZV1 1036 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 WWC3Q9ULE0 1092 aa3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 TPX2Q9ULW0 747 aaKnown RBP3.09□□□□□ -1.91
SNRNP40-207ENST00000491106 KIAA1324LA8MWY0 1029 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 FAM155AB1AL88 458 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 PATL2C9JE40 543 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 GIPC1O14908 333 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 TMPRSS2O15393 492 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 ZNF862O60290 1169 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 SPINK2P20155 84 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 ETF1P62495 437 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 XPCQ01831 940 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 MAP3K11Q16584 847 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 PPM1JQ5JR12 505 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 PRPF40BQ6NWY9 871 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 LLGL2Q6P1M3 1020 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 HDXQ7Z353 690 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 STK11IPQ8N1F8 1099 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 PLD6Q8N2A8 252 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 TOP6BLQ8N6T0 577 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 GRIN3AQ8TCU5 1115 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 JARID2Q92833 1246 aaPredicted RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 ALKBH8Q96BT7 664 aaKnown RBP3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 DISC1Q9NRI5 854 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 KRT82Q9NSB4 513 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 GTF2IRD1Q9UHL9 959 aa3.08□□□□□ -1.92
SNRNP40-207ENST00000491106 TMEM265A0A087WTH1 108 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 TREHO43280 583 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 LEFTY1O75610 366 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 CBX7O95931 251 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 EIF4BP23588 611 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 FGD1P98174 961 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 KCNA1Q09470 495 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 IKZF1Q13422 519 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 ENOX2Q16206 610 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 PKN1Q16512 942 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 CDKAL1Q5VV42 579 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 MPRIPQ6WCQ1 1025 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 KCT2Q8NC54 265 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 RNF214Q8ND24 703 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 GLIS3Q8NEA6 775 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 ZNF507Q8TCN5 953 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 XAGE3Q8WTP9 111 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 ISL2Q96A47 359 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 HRASLS5Q96KN8 279 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 SRCIN1Q9C0H9 1055 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 C1GALT1Q9NS00 363 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 FAM8A1Q9UBU6 413 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 CYP8B1Q9UNU6 501 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 GNEQ9Y223 722 aaKnown RBP3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 MYO15BQ96JP2 1530 aa3.07□□□□□ -1.92
SNRNP40-207ENST00000491106 USP17L7P0C7H9 530 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 YBX3P16989 372 aaKnown RBP eCLIP3.06□□□□□ -1.922e-10■□□□□ 11.1
SNRNP40-207ENST00000491106 DSC3Q14574 896 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 CCDC85BQ15834 202 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 IFI16Q16666 785 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 KIF4BQ2VIQ3 1234 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 EAPPQ56P03 285 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 ZNF574Q6ZN55 896 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 STK35Q8TDR2 534 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 FBF1Q8TES7 1133 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 SYTL4Q96C24 671 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 MISP3Q96FF7 219 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 NECAB3Q96P71 396 aaPredicted RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 SETDB2Q96T68 719 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 DUSP23Q9BVJ7 150 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 OSBPL7Q9BZF2 842 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 NRSN2Q9GZP1 204 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 RC3H2Q9HBD1 1191 aaKnown RBP3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 MRS2Q9HD23 443 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 PRDM10Q9NQV6 1147 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 VAV3Q9UKW4 847 aa3.06□□□□□ -1.92
SNRNP40-207ENST00000491106 PAGE1O75459 146 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 CD8BP10966 210 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 BMP6P22004 513 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 CD96P40200 585 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ERVK-24P63145 666 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ZP2Q05996 745 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 PSMD2Q13200 908 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 MSMPQ1L6U9 139 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ZC3H12AQ5D1E8 599 aaKnown RBP3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ANGEL2Q5VTE6 544 aaKnown RBP3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 PCNX4Q63HM2 1172 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 TTBK2Q6IQ55 1244 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 SPRED2Q7Z698 418 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 KSR1Q8IVT5 923 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 BCL7CQ8WUZ0 217 aaPredicted RBP3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ASB11Q8WXH4 323 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 ASB16Q96NS5 453 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 SLC38A3Q99624 504 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 BCL11AQ9H165 835 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 C12orf49Q9H741 205 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 GOLGA2P5Q9HBQ8 144 aa3.05□□□□□ -1.92
SNRNP40-207ENST00000491106 PAK6Q9NQU5 681 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms