RNA–Protein interactions for RNA: ENST00000490883.1

SEMA3A-207, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 237 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-207ENST00000490883 MPRIPQ6WCQ1 1025 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 PDZD3Q86UT5 571 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 KCNB2Q92953 911 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 CSRNP1Q96S65 589 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 DNAJC25Q9H1X3 360 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 ATXN3LQ9H3M9 355 aa7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 MBNL3Q9NUK0 354 aaKnown RBP7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 GPN3Q9UHW5 284 aaPredicted RBP7.47□□□□□ -1.21
SEMA3A-207ENST00000490883 DTHD1Q6ZMT9 781 aa7.46□□□□□ -1.22
SEMA3A-207ENST00000490883 TXNDC2Q86VQ3 553 aa7.46□□□□□ -1.22
SEMA3A-207ENST00000490883 STK11IPQ8N1F8 1099 aa7.46□□□□□ -1.22
SEMA3A-207ENST00000490883 PLAGL2Q9UPG8 496 aa7.46□□□□□ -1.22
SEMA3A-207ENST00000490883 FUT4P22083 530 aa7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 CITED4Q96RK1 184 aa7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 DUSP23Q9BVJ7 150 aa7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 KRTAP4-7Q9BYR0 210 aa7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 RC3H2Q9HBD1 1191 aaKnown RBP7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
SEMA3A-207ENST00000490883 OXCT1P55809 520 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 AOC3Q16853 763 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 ISL2Q96A47 359 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 TMEM39AQ9NV64 488 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 TRAK1Q9UPV9 953 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 IVNS1ABPQ9Y6Y0 642 aa7.44□□□□□ -1.22
SEMA3A-207ENST00000490883 PRKCQQ04759 706 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 MAP1SQ66K74 1059 aaPredicted RBP7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 TOP6BLQ8N6T0 577 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 LRRN4CLQ8ND94 238 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 PRDM7Q9NQW5 492 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 VAV3Q9UKW4 847 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 PCOLCE2Q9UKZ9 415 aa7.43□□□□□ -1.22
SEMA3A-207ENST00000490883 ITIH2P19823 946 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 SULF2Q8IWU5 870 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 PI4K2BQ8TCG2 481 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 HEXIM2Q96MH2 286 aaKnown RBP7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 BCO2Q9BYV7 579 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 SSU72Q9NP77 194 aaKnown RBP7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 CSADQ9Y600 493 aa7.42□□□□□ -1.22
SEMA3A-207ENST00000490883 BIN1O00499 593 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 CEACAM5P06731 702 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 IFI16Q16666 785 aaKnown RBP7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 ZC3H12AQ5D1E8 599 aaKnown RBP7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 NXPE4Q6UWF7 544 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 UBE3DQ7Z6J8 389 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 ATG4DQ86TL0 474 aaPredicted RBP7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 GPBAR1Q8TDU6 330 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 FAM168AQ92567 244 aa7.41□□□□□ -1.22
SEMA3A-207ENST00000490883 RBAK-RBAKDNI3L0D1 243 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 ARNTP27540 789 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 PPP2R3AQ06190 1150 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 ARHGAP27Q6ZUM4 889 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 CCER1Q8TC90 406 aaPredicted RBP7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 GRIN3AQ8TCU5 1115 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 ALKBH8Q96BT7 664 aaKnown RBP7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 HRASLS5Q96KN8 279 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 RBCK1Q9BYM8 510 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 NLRP2Q9NX02 1062 aa7.4□□□□□ -1.22
SEMA3A-207ENST00000490883 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 FAM214BQ7L5A3 538 aa7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 GZF1Q9H116 711 aaPredicted RBP7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 CBX8Q9HC52 389 aa7.39□□□□□ -1.23
SEMA3A-207ENST00000490883 ZNF252P-AS1Q0IIN9 211 aa7.38□□□□□ -1.23
SEMA3A-207ENST00000490883 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
SEMA3A-207ENST00000490883 SND1Q7KZF4 910 aaKnown RBP eCLIP7.38□□□□□ -1.23
SEMA3A-207ENST00000490883 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
SEMA3A-207ENST00000490883 DCDC2CA8MYV0 355 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 NME2P22392 152 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 NTF4P34130 210 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 ERVK-24P63145 666 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 C12orf40Q86WS4 652 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 MKNK2Q9HBH9 465 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 PPP4R2Q9NY27 417 aa7.37□□□□□ -1.23
SEMA3A-207ENST00000490883 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 PAGE1O75459 146 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 RASIP1Q5U651 963 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 ACSBG1Q96GR2 724 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 TNKS2Q9H2K2 1166 aa7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.36□□□□□ -1.23
SEMA3A-207ENST00000490883 PNMA6FA0A0J9YX94 578 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 SOWAHDA6NJG2 315 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 FBXO24O75426 580 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 FARP2O94887 1054 aaPredicted RBP7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 BMP6P22004 513 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 NECAB3Q96P71 396 aaPredicted RBP7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 CACNA2D2Q9NY47 1150 aa7.35□□□□□ -1.23
SEMA3A-207ENST00000490883 XRCC5P13010 732 aaKnown RBP7.34□□□□□ -1.23
SEMA3A-207ENST00000490883 DSC3Q14574 896 aa7.34□□□□□ -1.23
SEMA3A-207ENST00000490883 NKPD1Q17RQ9 610 aa7.34□□□□□ -1.23
SEMA3A-207ENST00000490883 ANGEL2Q5VTE6 544 aaKnown RBP7.34□□□□□ -1.23
SEMA3A-207ENST00000490883 SPACA3Q8IXA5 215 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms