RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 MSH6P52701 1360 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 TNFRSF21O75509 655 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 EDN3P14138 238 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 ELNP15502 786 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 RBM6P78332 1123 aaKnown RBP6.59□□□□□ -1.35
CSTF1-205ENST00000490539 COL9A3Q14050 684 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-205ENST00000490539 LRP8Q14114 963 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 CEP135Q66GS9 1140 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 GJD3Q8N144 294 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 C1orf127Q8N9H9 656 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 GOLGA2P5Q9HBQ8 144 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 AMOTL2Q9Y2J4 779 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 MYO5BQ9ULV0 1848 aa6.59□□□□□ -1.35
CSTF1-205ENST00000490539 NKTRP30414 1462 aaKnown RBP6.59□□□□□ -1.36
CSTF1-205ENST00000490539 ROBO1Q9Y6N7 1651 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 SPATA31A6Q5VVP1 1343 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 NWD1Q149M9 1564 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 A6NHS1 94 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 SOWAHDA6NJG2 315 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 C9orf172C9J069 976 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 NRG1Q02297 640 aaPredicted RBP6.58□□□□□ -1.36
CSTF1-205ENST00000490539 COL13A1Q5TAT6 717 aaPredicted RBP6.58□□□□□ -1.36
CSTF1-205ENST00000490539 FAM117BQ6P1L5 589 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 KRTAP19-1Q8IUB9 90 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 PBX4Q9BYU1 374 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 SRA1Q9HD15 236 aaKnown RBP6.58□□□□□ -1.36
CSTF1-205ENST00000490539 CNTN3Q9P232 1028 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 KANSL3Q9P2N6 904 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
CSTF1-205ENST00000490539 TMEM94Q12767 1356 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 CYP2E1P05181 493 aaPredicted RBP6.57□□□□□ -1.36
CSTF1-205ENST00000490539 PTPRAP18433 802 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 CABP4P57796 275 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 ARHGAP4P98171 946 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 FMR1NBQ8N0W7 255 aaPredicted RBP6.57□□□□□ -1.36
CSTF1-205ENST00000490539 CEP120Q8N960 986 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 C19orf44Q9H6X5 657 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 SALL4Q9UJQ4 1053 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 NCOA3Q9Y6Q9 1424 aa6.57□□□□□ -1.36
CSTF1-205ENST00000490539 DHX57Q6P158 1386 aaKnown RBP6.57□□□□□ -1.36
CSTF1-205ENST00000490539 NEXMIFQ5QGS0 1516 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 CDC27P30260 824 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 GRIK5Q16478 980 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 DMRTB1Q96MA1 342 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 RASSF4Q9H2L5 321 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 USP21Q9UK80 565 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 TRIM33Q9UPN9 1127 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 SPATA31E1Q6ZUB1 1445 aa6.56□□□□□ -1.36
CSTF1-205ENST00000490539 AFF2P51816 1311 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 ADGRF5Q8IZF2 1346 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 ATP11AP98196 1134 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 GRIK4Q16099 956 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 DEFB132Q7Z7B7 95 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 FBXO11Q86XK2 927 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 LACRTQ9GZZ8 138 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 ZFYVE28Q9HCC9 887 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 POGKQ9P215 609 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 STK26Q9P289 416 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 IVNS1ABPQ9Y6Y0 642 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 ADAMTS13Q76LX8 1427 aa6.55□□□□□ -1.36
CSTF1-205ENST00000490539 PDE2AO00408 941 aaPredicted RBP6.54□□□□□ -1.36
CSTF1-205ENST00000490539 HYAL3O43820 417 aaPredicted RBP6.54□□□□□ -1.36
CSTF1-205ENST00000490539 H2AFB1P0C5Y9 115 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 H2AFB2P0C5Z0 115 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 IGF2-ASQ6U949 168 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 OSMRQ99650 979 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 CHRDQ9H2X0 955 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 C14orf93Q9H972 538 aaKnown RBP6.54□□□□□ -1.36
CSTF1-205ENST00000490539 FOXD3Q9UJU5 478 aaPredicted RBP6.54□□□□□ -1.36
CSTF1-205ENST00000490539 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 XIRP1Q702N8 1843 aaKnown RBP6.54□□□□□ -1.36
CSTF1-205ENST00000490539 METP08581 1390 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 TONSLQ96HA7 1378 aa6.54□□□□□ -1.36
CSTF1-205ENST00000490539 MYOM2P54296 1465 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 PHLPP1O60346 1717 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 CHD2O14647 1828 aaKnown RBP6.53□□□□□ -1.36
CSTF1-205ENST00000490539 EREGO14944 169 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
CSTF1-205ENST00000490539 ECM1Q16610 540 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
CSTF1-205ENST00000490539 RBCK1Q9BYM8 510 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 DZANK1Q9NVP4 752 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 PPLO60437 1756 aa6.53□□□□□ -1.36
CSTF1-205ENST00000490539 COL16A1Q07092 1604 aaPredicted RBP6.53□□□□□ -1.36
CSTF1-205ENST00000490539 PIK3C2GO75747 1445 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 BLMP54132 1417 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 LAMC1P11047 1609 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 MAPK1P28482 360 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 ARL4DP49703 201 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 TMEM132EQ6IEE7 984 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
CSTF1-205ENST00000490539 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 TMEM102Q8N9M5 508 aaPredicted RBP6.52□□□□□ -1.37
CSTF1-205ENST00000490539 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms