RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 PKN2Q16513 984 aaKnown RBP12.71□□□□□ -0.37
RBM39-236ENST00000490484 SH3BP5LQ7L8J4 393 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 FAM43AQ8N2R8 423 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 FAM163AQ96GL9 167 aaPredicted RBP12.71□□□□□ -0.37
RBM39-236ENST00000490484 HPS5Q9UPZ3 1129 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 COG6Q9Y2V7 657 aa12.71□□□□□ -0.37
RBM39-236ENST00000490484 CETPP11597 493 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 SOX10P56693 466 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 RHBDL3P58872 404 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 SNAPC2Q13487 334 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 TAF1CQ15572 869 aaPredicted RBP12.7□□□□□ -0.38
RBM39-236ENST00000490484 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.7□□□□□ -0.38
RBM39-236ENST00000490484 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
RBM39-236ENST00000490484 ZNF112Q9UJU3 913 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 DDX19BQ9UMR2 479 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 TRIM17Q9Y577 477 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
RBM39-236ENST00000490484 DDTLA6NHG4 134 aaPredicted RBP12.69□□□□□ -0.38
RBM39-236ENST00000490484 LDHCP07864 332 aa12.69□□□□□ -0.38
RBM39-236ENST00000490484 SLURP2P0DP57 97 aa12.69□□□□□ -0.38
RBM39-236ENST00000490484 PPATQ06203 517 aa12.69□□□□□ -0.38
RBM39-236ENST00000490484 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
RBM39-236ENST00000490484 NAA16Q6N069 864 aaPredicted RBP12.69□□□□□ -0.38
RBM39-236ENST00000490484 FBXO46Q6PJ61 603 aaPredicted RBP12.69□□□□□ -0.38
RBM39-236ENST00000490484 AACSQ86V21 672 aa12.69□□□□□ -0.38
RBM39-236ENST00000490484 ERC1Q8IUD2 1116 aa12.69□□□□□ -0.38
RBM39-236ENST00000490484 EAF2Q96CJ1 260 aaPredicted RBP12.69□□□□□ -0.38
RBM39-236ENST00000490484 MYO5AQ9Y4I1 1855 aaKnown RBP12.68□□□□□ -0.38
RBM39-236ENST00000490484 BTBD19C9JJ37 291 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
RBM39-236ENST00000490484 ZAP70P43403 619 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 SCYL3Q8IZE3 742 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 CD99L2Q8TCZ2 262 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 ERO1AQ96HE7 468 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 ZNF512BQ96KM6 892 aaPredicted RBP12.68□□□□□ -0.38
RBM39-236ENST00000490484 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
RBM39-236ENST00000490484 ZFYVE28Q9HCC9 887 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 IL1RAPL2Q9NP60 686 aa12.68□□□□□ -0.38
RBM39-236ENST00000490484 PIH1D3Q9NQM4 214 aaKnown RBP12.68□□□□□ -0.38
RBM39-236ENST00000490484 AATFQ9NY61 560 aaKnown RBP eCLIP12.68□□□□□ -0.38
RBM39-236ENST00000490484 COL2A1P02458 1487 aaPredicted RBP12.67□□□□□ -0.38
RBM39-236ENST00000490484 FAM196BA6NMK8 535 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 PHF20L1A8MW92 1017 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 APBB1O00213 710 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 SP3Q02447 781 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
RBM39-236ENST00000490484 OTOP1Q7RTM1 612 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 ADGRA1Q86SQ6 560 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 SH3RF3Q8TEJ3 882 aaPredicted RBP12.67□□□□□ -0.38
RBM39-236ENST00000490484 OSBPL5Q9H0X9 879 aaPredicted RBP12.67□□□□□ -0.38
RBM39-236ENST00000490484 BCL11AQ9H165 835 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 PICK1Q9NRD5 415 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 ZBTB40Q9NUA8 1239 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 BRCA2P51587 3418 aa12.67□□□□□ -0.38
RBM39-236ENST00000490484 CDK5RAP2Q96SN8 1893 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 HMMRO75330 724 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 IDH1O75874 414 aaKnown RBP12.66□□□□□ -0.38
RBM39-236ENST00000490484 MAP4K4O95819 1239 aaPredicted RBP12.66□□□□□ -0.38
RBM39-236ENST00000490484 CAP1Q01518 475 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 C20orf194Q5TEA3 1177 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 ZCCHC17Q9NP64 241 aaKnown RBP12.66□□□□□ -0.38
RBM39-236ENST00000490484 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.66□□□□□ -0.38
RBM39-236ENST00000490484 KCNH4Q9UQ05 1017 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 ZSWIM8A7E2V4 1837 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 FOCADQ5VW36 1801 aa12.66□□□□□ -0.38
RBM39-236ENST00000490484 SIPA1L1O43166 1804 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 TNRC18O15417 2968 aaPredicted RBP12.65□□□□□ -0.38
RBM39-236ENST00000490484 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
RBM39-236ENST00000490484 BAG3O95817 575 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 PTPRAP18433 802 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 RGS19P49795 217 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 SIRT2Q8IXJ6 389 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
RBM39-236ENST00000490484 RHPN1Q8TCX5 695 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 EFCC1Q9HA90 598 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
RBM39-236ENST00000490484 ATAD5Q96QE3 1844 aa12.65□□□□□ -0.39
RBM39-236ENST00000490484 FLT1P17948 1338 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 PDHXO00330 501 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 TLR2O60603 784 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 CTNND1O60716 968 aaKnown RBP12.64□□□□□ -0.39
RBM39-236ENST00000490484 PLCG2P16885 1265 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 CYP7A1P22680 504 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 MAP3K10Q02779 954 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 MOGSQ13724 837 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 ANKRD23Q86SG2 305 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 CCDC84Q86UT8 332 aaPredicted RBP12.64□□□□□ -0.39
RBM39-236ENST00000490484 MAPKAPK5Q8IW41 473 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 KIF1BPQ96EK5 621 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 CHMP4BQ9H444 224 aaKnown RBP12.64□□□□□ -0.39
RBM39-236ENST00000490484 ANTXR1Q9H6X2 564 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.39
RBM39-236ENST00000490484 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 PTPRFP10586 1907 aa12.64□□□□□ -0.39
RBM39-236ENST00000490484 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
RBM39-236ENST00000490484 TBC1D12O60347 775 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms