RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
TTC28-207ENST00000490475 ZSCAN29Q8IWY8 852 aaPredicted RBP12.75□□□□□ -0.37
TTC28-207ENST00000490475 DOCK2Q92608 1830 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 XAGE2Q96GT9 111 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 FAM198AQ9UFP1 575 aa12.75□□□□□ -0.37
TTC28-207ENST00000490475 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 INPP5BP32019 993 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 TFCP2Q12800 502 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 NFIAQ12857 509 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.74□□□□□ -0.37
TTC28-207ENST00000490475 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
TTC28-207ENST00000490475 TBC1D2Q9BYX2 928 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
TTC28-207ENST00000490475 GPR75-ASB3A0A0A6YYF3 556 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 PDHXO00330 501 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
TTC28-207ENST00000490475 MS4A1P11836 297 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 ADORA1P30542 326 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 RGS3P49796 1198 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 SCYL3Q8IZE3 742 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 SPATA5Q8NB90 893 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 ZNF333Q96JL9 665 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 NOL10Q9BSC4 688 aaKnown RBP12.73□□□□□ -0.37
TTC28-207ENST00000490475 GPR108Q9NPR9 543 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
TTC28-207ENST00000490475 TBC1D12O60347 775 aa12.72□□□□□ -0.37
TTC28-207ENST00000490475 PLCG2P16885 1265 aa12.72□□□□□ -0.37
TTC28-207ENST00000490475 ARID4AP29374 1257 aaPredicted RBP12.72□□□□□ -0.37
TTC28-207ENST00000490475 BTDP43251 543 aa12.72□□□□□ -0.37
TTC28-207ENST00000490475 C17orf99Q6UX52 265 aa12.72□□□□□ -0.37
TTC28-207ENST00000490475 PCDH10Q9P2E7 1040 aa12.72□□□□□ -0.37
TTC28-207ENST00000490475 COL2A1P02458 1487 aaPredicted RBP12.72□□□□□ -0.37
TTC28-207ENST00000490475 HTTP42858 3142 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 RFX7Q2KHR2 1363 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 ATRNL1Q5VV63 1379 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 PNMA6EA0A0J9YXQ4 647 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 BAG3O95817 575 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 CAPN2P17655 700 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 MECOMQ03112 1051 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 SLC4A8Q2Y0W8 1093 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 CCDC158Q5M9N0 1113 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 TMED8Q6PL24 325 aaPredicted RBP12.71□□□□□ -0.37
TTC28-207ENST00000490475 LRP2BPQ9P2M1 347 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 PTCH2Q9Y6C5 1203 aa12.71□□□□□ -0.37
TTC28-207ENST00000490475 A0A0G2JLL6 359 aaPredicted RBP12.7□□□□□ -0.38
TTC28-207ENST00000490475 PHF20L1A8MW92 1017 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 PTPRAP18433 802 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
TTC28-207ENST00000490475 PRRT2Q7Z6L0 340 aaPredicted RBP12.7□□□□□ -0.38
TTC28-207ENST00000490475 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
TTC28-207ENST00000490475 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
TTC28-207ENST00000490475 RAI14Q9P0K7 980 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 HMG20BQ9P0W2 317 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 PNMA3Q9UL41 463 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 ZHX2Q9Y6X8 837 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 DOCK1Q14185 1865 aa12.7□□□□□ -0.38
TTC28-207ENST00000490475 POTEFA5A3E0 1075 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 FMNL1O95466 1100 aaPredicted RBP12.69□□□□□ -0.38
TTC28-207ENST00000490475 PSMC4P43686 418 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 FCGRTP55899 365 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 PICALMQ13492 652 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 RAET1EQ8TD07 263 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
TTC28-207ENST00000490475 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
TTC28-207ENST00000490475 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 HERC5Q9UII4 1024 aaKnown RBP12.69□□□□□ -0.38
TTC28-207ENST00000490475 AFG3L2Q9Y4W6 797 aa12.69□□□□□ -0.38
TTC28-207ENST00000490475 RHBDL3P58872 404 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
TTC28-207ENST00000490475 POLA2Q14181 598 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 TTC39AQ5SRH9 613 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 PROCA1Q8NCQ7 364 aaPredicted RBP12.68□□□□□ -0.38
TTC28-207ENST00000490475 SSH3Q8TE77 659 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.68□□□□□ -0.38
TTC28-207ENST00000490475 ZBTB40Q9NUA8 1239 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 CPA4Q9UI42 421 aa12.68□□□□□ -0.38
TTC28-207ENST00000490475 ADGRA2Q96PE1 1338 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 CENPFP49454 3210 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 PTPRFP10586 1907 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
TTC28-207ENST00000490475 GRK4P32298 578 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 MCAMP43121 646 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 UBXN2AP68543 259 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 MOGSQ13724 837 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 TNNI3KQ59H18 835 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
TTC28-207ENST00000490475 SH3BP5LQ7L8J4 393 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 SMCR8Q8TEV9 937 aaPredicted RBP12.67□□□□□ -0.38
TTC28-207ENST00000490475 AS3MTQ9HBK9 375 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 DDX4Q9NQI0 724 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms