RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 TLR7Q9NYK1 1049 aaKnown RBP21.33■■□□□ 1.01
SEC13-218ENST00000490283 OTOFQ9HC10 1997 aa21.33■■□□□ 1.01
SEC13-218ENST00000490283 TESPA1A2RU30 521 aaPredicted RBP21.32■■□□□ 1
SEC13-218ENST00000490283 CCDC85CA6NKD9 419 aa21.32■■□□□ 1
SEC13-218ENST00000490283 APBB1O00213 710 aa21.32■■□□□ 1
SEC13-218ENST00000490283 ZAP70P43403 619 aa21.32■■□□□ 1
SEC13-218ENST00000490283 ZFPM1Q8IX07 1006 aa21.32■■□□□ 1
SEC13-218ENST00000490283 RFX7Q2KHR2 1363 aa21.32■■□□□ 1
SEC13-218ENST00000490283 RAB11FIP3O75154 756 aa21.31■■□□□ 1
SEC13-218ENST00000490283 CYP2E1P05181 493 aaPredicted RBP21.31■■□□□ 1
SEC13-218ENST00000490283 CETPP11597 493 aa21.31■■□□□ 1
SEC13-218ENST00000490283 PLCG2P16885 1265 aa21.31■■□□□ 1
SEC13-218ENST00000490283 INPP5BP32019 993 aa21.31■■□□□ 1
SEC13-218ENST00000490283 PPATQ06203 517 aa21.31■■□□□ 1
SEC13-218ENST00000490283 PPIL2Q13356 520 aa21.31■■□□□ 1
SEC13-218ENST00000490283 SNAPC2Q13487 334 aa21.31■■□□□ 1
SEC13-218ENST00000490283 ZNF384Q8TF68 577 aa21.31■■□□□ 1
SEC13-218ENST00000490283 IL1RAPL2Q9NP60 686 aa21.31■■□□□ 1
SEC13-218ENST00000490283 ZNF112Q9UJU3 913 aa21.31■■□□□ 1
SEC13-218ENST00000490283 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
SEC13-218ENST00000490283 RHBDL3P58872 404 aa21.3■■□□□ 1
SEC13-218ENST00000490283 PKN2Q16513 984 aaKnown RBP21.3■■□□□ 1
SEC13-218ENST00000490283 TEX11Q8IYF3 940 aa21.3■■□□□ 1
SEC13-218ENST00000490283 MS4A4AQ96JQ5 239 aa21.3■■□□□ 1
SEC13-218ENST00000490283 DDX4Q9NQI0 724 aaKnown RBP21.3■■□□□ 1
SEC13-218ENST00000490283 IFIT2P09913 472 aaKnown RBP21.29■■□□□ 1
SEC13-218ENST00000490283 NOL9Q5SY16 702 aaKnown RBP21.29■■□□□ 1
SEC13-218ENST00000490283 C20orf194Q5TEA3 1177 aa21.29■■□□□ 1
SEC13-218ENST00000490283 BRI3BPQ8WY22 251 aa21.29■■□□□ 1
SEC13-218ENST00000490283 PICK1Q9NRD5 415 aa21.29■■□□□ 1
SEC13-218ENST00000490283 AK9Q5TCS8 1911 aa21.28■■□□□ 1
SEC13-218ENST00000490283 IRF6O14896 467 aa21.28■■□□□ 1
SEC13-218ENST00000490283 IDH1O75874 414 aaKnown RBP21.28■■□□□ 1
SEC13-218ENST00000490283 CRHR2Q13324 411 aa21.28■■□□□ 1
SEC13-218ENST00000490283 TAF1CQ15572 869 aaPredicted RBP21.28■■□□□ 1
SEC13-218ENST00000490283 PTPN18Q99952 460 aa21.28■■□□□ 1
SEC13-218ENST00000490283 BCL11AQ9H165 835 aa21.28■■□□□ 1
SEC13-218ENST00000490283 ZFYVE28Q9HCC9 887 aa21.28■■□□□ 1
SEC13-218ENST00000490283 AATFQ9NY61 560 aaKnown RBP eCLIP21.28■■□□□ 1
SEC13-218ENST00000490283 DDTLA6NHG4 134 aaPredicted RBP21.27■■□□□ 1
SEC13-218ENST00000490283 SH3BP5LQ7L8J4 393 aa21.27■■□□□ 1
SEC13-218ENST00000490283 SIRT2Q8IXJ6 389 aa21.27■■□□□ 1
SEC13-218ENST00000490283 R3HDMLQ9H3Y0 253 aa21.27■■□□□ 1
SEC13-218ENST00000490283 PIH1D3Q9NQM4 214 aaKnown RBP21.27■■□□□ 1
SEC13-218ENST00000490283 ATRNL1Q5VV63 1379 aa21.26■□□□□ 0.99
SEC13-218ENST00000490283 MAP3K12Q12852 859 aa21.26■□□□□ 0.99
SEC13-218ENST00000490283 TTF1Q15361 905 aaPredicted RBP21.26■□□□□ 0.99
SEC13-218ENST00000490283 TMED8Q6PL24 325 aaPredicted RBP21.26■□□□□ 0.99
SEC13-218ENST00000490283 CERS3Q8IU89 383 aa21.26■□□□□ 0.99
SEC13-218ENST00000490283 SCYL3Q8IZE3 742 aa21.26■□□□□ 0.99
SEC13-218ENST00000490283 SH3RF3Q8TEJ3 882 aaPredicted RBP21.26■□□□□ 0.99
SEC13-218ENST00000490283 ERO1AQ96HE7 468 aa21.26■□□□□ 0.99
SEC13-218ENST00000490283 OSBPL5Q9H0X9 879 aaPredicted RBP21.26■□□□□ 0.99
SEC13-218ENST00000490283 ZCCHC17Q9NP64 241 aaKnown RBP21.26■□□□□ 0.99
SEC13-218ENST00000490283 LAMB1P07942 1786 aa21.25■□□□□ 0.99
SEC13-218ENST00000490283 CYP7A1P22680 504 aa21.25■□□□□ 0.99
SEC13-218ENST00000490283 PPP4CP60510 307 aa21.25■□□□□ 0.99
SEC13-218ENST00000490283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.25■□□□□ 0.99
SEC13-218ENST00000490283 MAST2Q6P0Q8 1798 aa21.25■□□□□ 0.99
SEC13-218ENST00000490283 COL2A1P02458 1487 aaPredicted RBP21.25■□□□□ 0.99
SEC13-218ENST00000490283 CTNND1O60716 968 aaKnown RBP21.24■□□□□ 0.99
SEC13-218ENST00000490283 FAM43AQ8N2R8 423 aa21.24■□□□□ 0.99
SEC13-218ENST00000490283 YTHDC1Q96MU7 727 aaKnown RBP21.24■□□□□ 0.99
SEC13-218ENST00000490283 DHX36Q9H2U1 1008 aaKnown RBP21.24■□□□□ 0.99
SEC13-218ENST00000490283 DOCK2Q92608 1830 aa21.24■□□□□ 0.99
SEC13-218ENST00000490283 PHF20L1A8MW92 1017 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 TBC1D12O60347 775 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 SP3Q02447 781 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 MAP3K10Q02779 954 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 TRIM34Q9BYJ4 488 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 KCNH4Q9UQ05 1017 aa21.23■□□□□ 0.99
SEC13-218ENST00000490283 BTBD19C9JJ37 291 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 CXCL11O14625 94 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 ARHGEF6Q15052 776 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.22■□□□□ 0.99
SEC13-218ENST00000490283 TGFBRAP1Q8WUH2 860 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 NDUFB9Q9Y6M9 179 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 ZHX2Q9Y6X8 837 aa21.22■□□□□ 0.99
SEC13-218ENST00000490283 FBXO46Q6PJ61 603 aaPredicted RBP21.21■□□□□ 0.99
SEC13-218ENST00000490283 ADGRA1Q86SQ6 560 aa21.21■□□□□ 0.99
SEC13-218ENST00000490283 MAPKAPK5Q8IW41 473 aa21.21■□□□□ 0.99
SEC13-218ENST00000490283 DNAJC2Q99543 621 aaKnown RBP21.21■□□□□ 0.99
SEC13-218ENST00000490283 ANTXR1Q9H6X2 564 aa21.21■□□□□ 0.99
SEC13-218ENST00000490283 PI4KBQ9UBF8 816 aa21.21■□□□□ 0.99
SEC13-218ENST00000490283 HERC5Q9UII4 1024 aaKnown RBP21.21■□□□□ 0.99
SEC13-218ENST00000490283 TRIM17Q9Y577 477 aa21.21■□□□□ 0.99
SEC13-218ENST00000490283 PTPRAP18433 802 aa21.2■□□□□ 0.98
SEC13-218ENST00000490283 ANKRD23Q86SG2 305 aa21.2■□□□□ 0.98
SEC13-218ENST00000490283 CD99L2Q8TCZ2 262 aa21.2■□□□□ 0.98
SEC13-218ENST00000490283 HPS5Q9UPZ3 1129 aa21.2■□□□□ 0.98
SEC13-218ENST00000490283 FLT1P17948 1338 aa21.2■□□□□ 0.98
SEC13-218ENST00000490283 HLA-DOAP06340 250 aa21.19■□□□□ 0.98
SEC13-218ENST00000490283 USP5P45974 858 aa21.19■□□□□ 0.98
SEC13-218ENST00000490283 RRP1P56182 461 aaKnown RBP21.19■□□□□ 0.98
SEC13-218ENST00000490283 FASTKD5Q7L8L6 764 aaKnown RBP21.19■□□□□ 0.98
SEC13-218ENST00000490283 CRACR2BQ8N4Y2 399 aaPredicted RBP21.19■□□□□ 0.98
SEC13-218ENST00000490283 MIGA1Q8NAN2 632 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 196.5 ms