RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 ASTN2O75129 1339 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-210ENST00000490081 PASKQ96RG2 1323 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 M0R2C6 588 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 ITGBL1O95965 494 aaPredicted RBP14.97□□□□□ -0.01
HDAC1-210ENST00000490081 MAP3K10Q02779 954 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 CASC1Q6TDU7 716 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 KRT26Q7Z3Y9 468 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 SEC62Q99442 399 aaKnown RBP14.97□□□□□ -0.01
HDAC1-210ENST00000490081 ARMT1Q9H993 441 aa14.97□□□□□ -0.01
HDAC1-210ENST00000490081 ZMYM6O95789 1325 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 CCDC171Q6TFL3 1326 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 MYH1P12882 1939 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 CLRN2A0PK11 232 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 GSG1L2A8MUP6 293 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 SGSM2O43147 1006 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
HDAC1-210ENST00000490081 NFIAQ12857 509 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 RASA3Q14644 834 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 CWC27Q6UX04 472 aaKnown RBP14.96□□□□□ -0.01
HDAC1-210ENST00000490081 METTL16Q86W50 562 aaKnown RBP14.96□□□□□ -0.01
HDAC1-210ENST00000490081 TGFBRAP1Q8WUH2 860 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 HOOK2Q96ED9 719 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 TEPSINQ96N21 525 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
HDAC1-210ENST00000490081 DDX4Q9NQI0 724 aaKnown RBP14.96□□□□□ -0.01
HDAC1-210ENST00000490081 CLEC11AQ9Y240 323 aa14.96□□□□□ -0.01
HDAC1-210ENST00000490081 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
HDAC1-210ENST00000490081 SUPT20HL1Q3ZLR7 823 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 SBK1Q52WX2 424 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 ESYT1Q9BSJ8 1104 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 DSCC1Q9BVC3 393 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 OSBPL5Q9H0X9 879 aaPredicted RBP14.95□□□□□ -0.02
HDAC1-210ENST00000490081 VEZTQ9HBM0 779 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 CREBZFQ9NS37 354 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
HDAC1-210ENST00000490081 FLT1P17948 1338 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 TCP10L2B9ZVM9 353 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 TBC1D12O60347 775 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 HSPD1P10809 573 aaKnown RBP14.94□□□□□ -0.02
HDAC1-210ENST00000490081 USP5P45974 858 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 MAP1SQ66K74 1059 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-210ENST00000490081 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-210ENST00000490081 FOXP4Q8IVH2 680 aaPredicted RBP14.94□□□□□ -0.02
HDAC1-210ENST00000490081 DDRGK1Q96HY6 314 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 NACAP1Q9BZK3 213 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 TRPM7Q96QT4 1865 aa14.94□□□□□ -0.02
HDAC1-210ENST00000490081 DDX60LQ5H9U9 1706 aaKnown RBP14.94□□□□□ -0.02
HDAC1-210ENST00000490081 UNCXA6NJT0 531 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 FOXP2O15409 715 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 PRKAB2O43741 272 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 CACNB3P54284 484 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 COL13A1Q5TAT6 717 aaPredicted RBP14.93□□□□□ -0.02
HDAC1-210ENST00000490081 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 USP48Q86UV5 1035 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 EHD4Q9H223 541 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 PI4KBQ9UBF8 816 aa14.93□□□□□ -0.02
HDAC1-210ENST00000490081 BAZ2AQ9UIF9 1905 aaKnown RBP14.92□□□□□ -0.02
HDAC1-210ENST00000490081 FKBP1BP68106 108 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 SH3BP5LQ7L8J4 393 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 MAPKAPK5Q8IW41 473 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 ZFPM1Q8IX07 1006 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 MAP4K1Q92918 833 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 GLIS2Q9BZE0 524 aaPredicted RBP14.92□□□□□ -0.02
HDAC1-210ENST00000490081 TMEM39BQ9GZU3 492 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 IL25Q9H293 177 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 NAV1Q8NEY1 1877 aa14.92□□□□□ -0.02
HDAC1-210ENST00000490081 DDTLA6NHG4 134 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-210ENST00000490081 TCP10Q12799 353 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 C12orf60Q5U649 245 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 CCDC129Q6ZRS4 1044 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 SDR42E1Q8WUS8 393 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 CDCA5Q96FF9 252 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 EPB41L4AQ9HCS5 686 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-210ENST00000490081 MCM9Q9NXL9 1143 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 ARPP21Q9UBL0 812 aaPredicted RBP14.91□□□□□ -0.02
HDAC1-210ENST00000490081 CTNNA3Q9UI47 895 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 HERC5Q9UII4 1024 aaKnown RBP14.91□□□□□ -0.02
HDAC1-210ENST00000490081 ANAPC4Q9UJX5 808 aa14.91□□□□□ -0.02
HDAC1-210ENST00000490081 ADM5C9JUS6 153 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 FGAP02671 866 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 HSPA1AP0DMV8 641 aaKnown RBP14.9□□□□□ -0.02
HDAC1-210ENST00000490081 HSPA1BP0DMV9 641 aaKnown RBP14.9□□□□□ -0.02
HDAC1-210ENST00000490081 NF2P35240 595 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 NT5C2P49902 561 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 PICALMQ13492 652 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 NBPF12Q5TAG4 269 aaPredicted RBP14.9□□□□□ -0.02
HDAC1-210ENST00000490081 VPS53Q5VIR6 699 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 CTR9Q6PD62 1173 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 AMOTL1Q8IY63 956 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 PALD1Q9ULE6 856 aa14.9□□□□□ -0.02
HDAC1-210ENST00000490081 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 USP17L12C9JPN9 530 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 USP17L21D6R901 530 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 REC8O95072 547 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 APPP05067 770 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 GABPAQ06546 454 aa14.89□□□□□ -0.03
HDAC1-210ENST00000490081 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms