RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CCDC122Q5T0U0 273 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 MAP3K21Q5TCX8 1036 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 DZIP3Q86Y13 1208 aaKnown RBP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 RAB17Q9H0T7 212 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ARHGAP6O43182 974 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 FLOT1O75955 427 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF445P59923 1031 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 MAGEB6Q8N7X4 407 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 APPBP2Q92624 585 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 CCDC114Q96M63 670 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 USP26Q9BXU7 913 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 MIS12Q9H081 205 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 AK9Q5TCS8 1911 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ARHGEF5Q12774 1597 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ATP2A3Q93084 1043 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF622Q969S3 477 aaKnown RBP eCLIP9.89□□□□□ -0.83
LSAMP-205ENST00000490035 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
LSAMP-205ENST00000490035 DDB1Q16531 1140 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 PHLDB2Q86SQ0 1253 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 PLBD2Q8NHP8 589 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA5Q8TBA6 731 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 ZNF569Q5MCW4 686 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 VPS52Q8N1B4 723 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 GABPB1Q06547 395 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 IP6K1Q92551 441 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 C19orf44Q9H6X5 657 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 CETN3O15182 167 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 RUNDC3BQ96NL0 473 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 SNRKQ9NRH2 765 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 ATP7AQ04656 1500 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 SYNMO15061 1565 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 GIPC1O14908 333 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 IFNKQ9P0W0 207 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 ZRANB1Q9UGI0 708 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 MARCKSP29966 332 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 TBC1D22AQ8WUA7 517 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 NOC4LQ9BVI4 516 aaKnown RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 PANK2Q9BZ23 570 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 ARHGEF10O15013 1369 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 LIG1P18858 919 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 PRIM1P49642 420 aaKnown RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 EIF4A2Q14240 407 aaKnown RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 NECAB1Q8N987 351 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 SLC17A8Q8NDX2 589 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 CCT6BQ92526 530 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 GUCA1BQ9UMX6 200 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 ISM2Q6H9L7 571 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 RSPH14Q9UHP6 348 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 AGTPBP1Q9UPW5 1226 aa9.88□□□□□ -0.83
LSAMP-205ENST00000490035 NUP153P49790 1475 aaKnown RBP9.88□□□□□ -0.83
LSAMP-205ENST00000490035 KIAA0232Q92628 1395 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 HACE1Q8IYU2 909 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 XRCC6P12956 609 aaKnown RBP eCLIP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 P4HA1P13674 534 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 PDE6BP35913 854 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 LMNTD2Q8IXW0 634 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 JDP2Q8WYK2 163 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 H0YCG3 227 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 MCM7P33993 719 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 PPM1FP49593 454 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 CFAP221Q4G0U5 840 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 SUPT20HQ8NEM7 779 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 RAB3IPQ96QF0 476 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 MAGEF1Q9HAY2 307 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 C8orf34Q49A92 452 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 C8orf74Q6P047 294 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 P3H4Q92791 437 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 TBC1D8BQ0IIM8 1120 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 CCDC125Q86Z20 511 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 METTL22Q9BUU2 404 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 IRS4O14654 1257 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 STRN3Q13033 797 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 ANO1Q5XXA6 986 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 PPP1R2P3Q6NXS1 205 aa9.87□□□□□ -0.83
LSAMP-205ENST00000490035 SMAP1Q8IYB5 467 aaPredicted RBP9.87□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA8QA0A0J9YX86 632 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA8OA6NCC3 632 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 GOLGA8NF8WBI6 632 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PAK2Q13177 524 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 FAM81BQ96LP2 452 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PSMC4P43686 418 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 ASIC2Q16515 512 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 TRIML1Q8N9V2 468 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 SELENOSQ9BQE4 189 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PTGS1P23219 599 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 PAK1Q13153 545 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 VPS18Q9P253 973 aa9.86□□□□□ -0.83
LSAMP-205ENST00000490035 SIRT1Q96EB6 747 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms