RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 TNFAIP1Q13829 316 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 RASA3Q14644 834 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 MAP1SQ66K74 1059 aaPredicted RBP19.3■□□□□ 0.68
CLIC4-203ENST00000489758 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 FAM151AQ8WW52 585 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 TEPSINQ96N21 525 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 EPB41L4AQ9HCS5 686 aaPredicted RBP19.3■□□□□ 0.68
CLIC4-203ENST00000489758 DCP1AQ9NPI6 582 aaPredicted RBP19.3■□□□□ 0.68
CLIC4-203ENST00000489758 ATP8A2Q9NTI2 1148 aa19.3■□□□□ 0.68
CLIC4-203ENST00000489758 PATL2C9JE40 543 aaKnown RBP19.29■□□□□ 0.68
CLIC4-203ENST00000489758 USP5P45974 858 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 MFAP1P55081 439 aaKnown RBP19.29■□□□□ 0.68
CLIC4-203ENST00000489758 CHADLQ6NUI6 762 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 CASC1Q6TDU7 716 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 DLK2Q6UY11 383 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 SH3BP5LQ7L8J4 393 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 SULF1Q8IWU6 871 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 CDAN1Q8IWY9 1227 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
CLIC4-203ENST00000489758 TMEM39BQ9GZU3 492 aa19.29■□□□□ 0.68
CLIC4-203ENST00000489758 OSBPL5Q9H0X9 879 aaPredicted RBP19.29■□□□□ 0.68
CLIC4-203ENST00000489758 RPAP1Q9BWH6 1393 aaPredicted RBP19.29■□□□□ 0.68
CLIC4-203ENST00000489758 COL2A1P02458 1487 aaPredicted RBP19.28■□□□□ 0.68
CLIC4-203ENST00000489758 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
CLIC4-203ENST00000489758 TNNI2P48788 182 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 GIMAP6Q6P9H5 292 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 CDC37L1Q7L3B6 337 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 USP48Q86UV5 1035 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 PPP2R3BQ9Y5P8 575 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 ATRNL1Q5VV63 1379 aa19.28■□□□□ 0.68
CLIC4-203ENST00000489758 AK9Q5TCS8 1911 aa19.27■□□□□ 0.67
CLIC4-203ENST00000489758 ECM29Q5VYK3 1845 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 DDTLA6NHG4 134 aaPredicted RBP19.26■□□□□ 0.67
CLIC4-203ENST00000489758 ITGBL1O95965 494 aaPredicted RBP19.26■□□□□ 0.67
CLIC4-203ENST00000489758 PTH1RQ03431 593 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 FSTL1Q12841 308 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 ALX1Q15699 326 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 C8orf34Q49A92 452 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 PRAMEF18Q5VWM3 479 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 IFNL3Q8IZI9 196 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 DSCC1Q9BVC3 393 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 SAP30BPQ9UHR5 308 aaKnown RBP19.26■□□□□ 0.67
CLIC4-203ENST00000489758 PALD1Q9ULE6 856 aa19.26■□□□□ 0.67
CLIC4-203ENST00000489758 TRAF5O00463 557 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 APPP05067 770 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 EVX2Q03828 476 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 LSG1Q9H089 658 aaKnown RBP19.25■□□□□ 0.67
CLIC4-203ENST00000489758 MCM9Q9NXL9 1143 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 DDX60LQ5H9U9 1706 aaKnown RBP19.25■□□□□ 0.67
CLIC4-203ENST00000489758 CEP350Q5VT06 3117 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 ZMYM6O95789 1325 aa19.25■□□□□ 0.67
CLIC4-203ENST00000489758 SSC5DA1L4H1 1573 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 CYP2D6P10635 497 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 NBPF12Q5TAG4 269 aaPredicted RBP19.24■□□□□ 0.67
CLIC4-203ENST00000489758 CTR9Q6PD62 1173 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 SMC1BQ8NDV3 1235 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 CDCA5Q96FF9 252 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
CLIC4-203ENST00000489758 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
CLIC4-203ENST00000489758 CYP2D7A0A087X1C5 515 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 USP17L12C9JPN9 530 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 USP17L21D6R901 530 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 SMIM22K7EJ46 135 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 FGAP02671 866 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 TDO2P48775 406 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 PLCD1P51178 756 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 FMR1Q06787 632 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLIC4-203ENST00000489758 SBK1Q52WX2 424 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 IFFO2Q5TF58 517 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 C12orf60Q5U649 245 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 DDRGK1Q96HY6 314 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 CSRNP1Q96S65 589 aa19.23■□□□□ 0.67
CLIC4-203ENST00000489758 ARPP21Q9UBL0 812 aaPredicted RBP19.23■□□□□ 0.67
CLIC4-203ENST00000489758 SLC4A8Q2Y0W8 1093 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 ZSCAN29Q8IWY8 852 aaPredicted RBP19.22■□□□□ 0.67
CLIC4-203ENST00000489758 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 NAPBQ9H115 298 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 PASKQ96RG2 1323 aa19.22■□□□□ 0.67
CLIC4-203ENST00000489758 SLURP2P0DP57 97 aa19.21■□□□□ 0.67
CLIC4-203ENST00000489758 KIAA1211Q6ZU35 1233 aa19.21■□□□□ 0.67
CLIC4-203ENST00000489758 METTL16Q86W50 562 aaKnown RBP19.21■□□□□ 0.67
CLIC4-203ENST00000489758 DNAJC5GQ8N7S2 189 aa19.21■□□□□ 0.67
CLIC4-203ENST00000489758 EHD4Q9H223 541 aa19.21■□□□□ 0.67
CLIC4-203ENST00000489758 PI4KBQ9UBF8 816 aa19.21■□□□□ 0.67
CLIC4-203ENST00000489758 CDK5RAP2Q96SN8 1893 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 POLR3DP05423 398 aaPredicted RBP19.2■□□□□ 0.66
CLIC4-203ENST00000489758 HTRA3P83110 453 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 MAP3K10Q02779 954 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 GABPAQ06546 454 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 TTC6Q86TZ1 520 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 DNAJC18Q9H819 358 aa19.2■□□□□ 0.66
CLIC4-203ENST00000489758 ROBO3Q96MS0 1386 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 REC8O95072 547 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 SEC24BO95487 1268 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 HLA-DOAP06340 250 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 PPARAQ07869 468 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 SUPT20HL1Q3ZLR7 823 aa19.19■□□□□ 0.66
CLIC4-203ENST00000489758 NBPF3Q9H094 633 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms