RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 ATP2B2Q01814 1243 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■■□ 21.2
ABCD4-214ENST00000489678 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
ABCD4-214ENST00000489678 MYH13Q9UKX3 1938 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 PLCD1P51178 756 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 AK2P54819 239 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 KIAA2012Q0VF49 1180 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 RUFY3Q7L099 469 aa12.21□□□□□ -0.46
ABCD4-214ENST00000489678 DDX4Q9NQI0 724 aaKnown RBP12.21□□□□□ -0.46
ABCD4-214ENST00000489678 TCRBV5S4A2TA0A5A2 114 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 B4E1Z4 1266 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 GMPSP49915 693 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-214ENST00000489678 CD2APQ9Y5K6 639 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 IRS2Q9Y4H2 1338 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 CREB3L3Q68CJ9 461 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 CAVIN1Q6NZI2 390 aaKnown RBP12.2□□□□□ -0.46
ABCD4-214ENST00000489678 APPBP2Q92624 585 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 NAPBQ9H115 298 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 ZNF408Q9H9D4 720 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 USP40Q9NVE5 1235 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 DAGLAQ9Y4D2 1042 aa12.2□□□□□ -0.46
ABCD4-214ENST00000489678 A0A0U1RQG5 324 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 USP17L3A6NCW0 530 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 USP17L4A6NCW7 530 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 USP17L1Q7RTZ2 530 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 TBC1D10CQ8IV04 446 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 TEX11Q8IYF3 940 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 EYA3Q99504 573 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 RRAGDQ9NQL2 400 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 FBXO3Q9UK99 471 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 SLC27A2O14975 620 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 RANBP6O60518 1105 aaKnown RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 LARGE1O95461 756 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 DACT2Q5SW24 774 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 RUFY2Q8WXA3 655 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 STRBPQ96SI9 672 aaKnown RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-214ENST00000489678 NECTIN1Q15223 517 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 KCNB2Q92953 911 aa12.19□□□□□ -0.46
ABCD4-214ENST00000489678 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 CRKP46108 304 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 GRM1Q13255 1194 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 ZSCAN23Q3MJ62 389 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 RTKN2Q8IZC4 609 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 TMEM39BQ9GZU3 492 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 COA1Q9GZY4 146 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 GSG1L2A8MUP6 293 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 UBE2Q2LH0YL09 131 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 DGKZQ13574 1117 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 TRPM4Q8TD43 1214 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
ABCD4-214ENST00000489678 NCOA5Q9HCD5 579 aaKnown RBP12.18□□□□□ -0.46
ABCD4-214ENST00000489678 ZYXQ15942 572 aaKnown RBP12.17□□□□□ -0.46
ABCD4-214ENST00000489678 IFNL3Q8IZI9 196 aa12.17□□□□□ -0.46
ABCD4-214ENST00000489678 MAP4K1Q92918 833 aa12.17□□□□□ -0.46
ABCD4-214ENST00000489678 AKAP11Q9UKA4 1901 aa12.17□□□□□ -0.46
ABCD4-214ENST00000489678 GDF11O95390 407 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 IL1R1P14778 569 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ZNF445P59923 1031 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 WDR66Q8TBY9 1149 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 NEDD4P46934 1319 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 MPHOSPH10O00566 681 aaKnown RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 MKRN3Q13064 507 aaKnown RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 TTF1Q15361 905 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 MOB2Q70IA6 237 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 OGFOD1Q8N543 542 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 RIOK1Q9BRS2 568 aaKnown RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 NBPF3Q9H094 633 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ZSWIM6Q9HCJ5 1215 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 CNOT7Q9UIV1 285 aaKnown RBP12.16□□□□□ -0.46
ABCD4-214ENST00000489678 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ADAMTSL1Q8N6G6 1762 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ST3GAL1Q11201 340 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
ABCD4-214ENST00000489678 ZNF213O14771 459 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 PODNQ7Z5L7 613 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 RTFDC1Q9BY42 306 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-214ENST00000489678 GDPD2Q9HCC8 539 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 CLEC11AQ9Y240 323 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-214ENST00000489678 APOBRQ0VD83 1088 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
ABCD4-214ENST00000489678 BRF1Q92994 677 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 DDX11Q96FC9 970 aa12.15□□□□□ -0.46
ABCD4-214ENST00000489678 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms