RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 ELP3Q9H9T3 547 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 TSKSQ9UJT2 592 aa16.27■□□□□ 0.2
CCL28-202ENST00000489442 GOLIM4O00461 696 aa16.26■□□□□ 0.19
CCL28-202ENST00000489442 TRPA1O75762 1119 aa16.26■□□□□ 0.19
CCL28-202ENST00000489442 ZBTB48P10074 688 aaPredicted RBP16.26■□□□□ 0.19
CCL28-202ENST00000489442 HSPA8P11142 646 aaKnown RBP16.26■□□□□ 0.19
CCL28-202ENST00000489442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.26■□□□□ 0.19
CCL28-202ENST00000489442 WNK4Q96J92 1243 aa16.26■□□□□ 0.19
CCL28-202ENST00000489442 DDX4Q9NQI0 724 aaKnown RBP16.26■□□□□ 0.19
CCL28-202ENST00000489442 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
CCL28-202ENST00000489442 ATP5JP18859 108 aa16.25■□□□□ 0.19
CCL28-202ENST00000489442 MAPK8IP2Q13387 824 aaPredicted RBP16.25■□□□□ 0.19
CCL28-202ENST00000489442 VGLL4Q14135 290 aa16.25■□□□□ 0.19
CCL28-202ENST00000489442 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
CCL28-202ENST00000489442 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
CCL28-202ENST00000489442 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
CCL28-202ENST00000489442 SH3RF3Q8TEJ3 882 aaPredicted RBP16.25■□□□□ 0.19
CCL28-202ENST00000489442 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
CCL28-202ENST00000489442 RNF186Q9NXI6 227 aa16.25■□□□□ 0.19
CCL28-202ENST00000489442 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 MANSC4A6NHS7 340 aaPredicted RBP16.24■□□□□ 0.19
CCL28-202ENST00000489442 NPM3O75607 178 aaKnown RBP16.24■□□□□ 0.19
CCL28-202ENST00000489442 INHBEP58166 350 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 PPP4CP60510 307 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 ADGRA1Q86SQ6 560 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 CERS3Q8IU89 383 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
CCL28-202ENST00000489442 OPTNQ96CV9 577 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 PAG1Q9NWQ8 432 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 SAGE1Q9NXZ1 904 aa16.24■□□□□ 0.19
CCL28-202ENST00000489442 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
CCL28-202ENST00000489442 TM4SF4P48230 202 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 MIGA1Q8NAN2 632 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 TGFBRAP1Q8WUH2 860 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 ECHDC1Q9NTX5 307 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 RFX7Q2KHR2 1363 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 CDK5RAP2Q96SN8 1893 aa16.23■□□□□ 0.19
CCL28-202ENST00000489442 DYNLL1P63167 89 aaKnown RBP16.22■□□□□ 0.19
CCL28-202ENST00000489442 SH3BP5LQ7L8J4 393 aa16.22■□□□□ 0.19
CCL28-202ENST00000489442 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
CCL28-202ENST00000489442 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
CCL28-202ENST00000489442 OTUD5Q96G74 571 aa16.22■□□□□ 0.19
CCL28-202ENST00000489442 HAUS7Q99871 368 aa16.22■□□□□ 0.19
CCL28-202ENST00000489442 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCL28-202ENST00000489442 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
CCL28-202ENST00000489442 RWDD1Q9H446 243 aaPredicted RBP16.22■□□□□ 0.19
CCL28-202ENST00000489442 PDE6AP16499 860 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 INPP5BP32019 993 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 USP5P45974 858 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.19
CCL28-202ENST00000489442 ANKRD45Q5TZF3 282 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 ERO1BQ86YB8 467 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 MAPKAPK5Q8IW41 473 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 GCC1Q96CN9 775 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 SNCAIPQ9Y6H5 919 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 MYH7P12883 1935 aa16.21■□□□□ 0.19
CCL28-202ENST00000489442 MAGEB6P1A0A0J9YX57 407 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 ALDH1A1P00352 501 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 GJA5P36382 358 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 GTF2A2P52657 109 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 TNS4Q8IZW8 715 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 TRIM34Q9BYJ4 488 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
CCL28-202ENST00000489442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCL28-202ENST00000489442 ZNF112Q9UJU3 913 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 FOCADQ5VW36 1801 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 MYH1P12882 1939 aa16.2■□□□□ 0.18
CCL28-202ENST00000489442 SPDYE5A6NIY4 337 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 ATRNL1Q5VV63 1379 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 ZSCAN25Q6NSZ9 544 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 PICK1Q9NRD5 415 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 PI4KBQ9UBF8 816 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 FLT1P17948 1338 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 ERC2O15083 957 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 PPATQ06203 517 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 TSHZ3Q63HK5 1081 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
CCL28-202ENST00000489442 SAP30BPQ9UHR5 308 aaKnown RBP16.19■□□□□ 0.18
CCL28-202ENST00000489442 COL2A1P02458 1487 aaPredicted RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 TTC41PQ6P2S7 1318 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 CCL15-CCL14A0A0B4J2E2 113 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 TBC1D12O60347 775 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 HLA-DOAP06340 250 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 MAP3K10Q02779 954 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 PPIL2Q13356 520 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 SNAPC2Q13487 334 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 CCL15Q16663 113 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 NOL9Q5SY16 702 aaKnown RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 CRNKL1Q9BZJ0 848 aaKnown RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 HERC5Q9UII4 1024 aaKnown RBP16.18■□□□□ 0.18
CCL28-202ENST00000489442 PALD1Q9ULE6 856 aa16.18■□□□□ 0.18
CCL28-202ENST00000489442 LAMB1P07942 1786 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms