RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 LHX8Q68G74 356 aa19.26■□□□□ 0.67
UFD1-209ENST00000489406 FAM151AQ8WW52 585 aa19.26■□□□□ 0.67
UFD1-209ENST00000489406 THEGQ9P2T0 379 aa19.26■□□□□ 0.67
UFD1-209ENST00000489406 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
UFD1-209ENST00000489406 CHAF1AQ13111 956 aaPredicted RBP19.25■□□□□ 0.67
UFD1-209ENST00000489406 FAM84BQ96KN1 310 aaPredicted RBP19.25■□□□□ 0.67
UFD1-209ENST00000489406 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
UFD1-209ENST00000489406 IQSEC3Q9UPP2 1182 aaPredicted RBP19.25■□□□□ 0.67
UFD1-209ENST00000489406 AFG3L2Q9Y4W6 797 aa19.25■□□□□ 0.67
UFD1-209ENST00000489406 CCND3P30281 292 aaPredicted RBP19.24■□□□□ 0.67
UFD1-209ENST00000489406 MRPS5P82675 430 aaKnown RBP19.24■□□□□ 0.67
UFD1-209ENST00000489406 PDE3AQ14432 1141 aa19.24■□□□□ 0.67
UFD1-209ENST00000489406 LRFN3Q9BTN0 628 aa19.24■□□□□ 0.67
UFD1-209ENST00000489406 PICK1Q9NRD5 415 aa19.24■□□□□ 0.67
UFD1-209ENST00000489406 MAST2Q6P0Q8 1798 aa19.24■□□□□ 0.67
UFD1-209ENST00000489406 LTBP2Q14767 1821 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 PTPRAP18433 802 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 CACNB2Q08289 660 aaPredicted RBP19.23■□□□□ 0.67
UFD1-209ENST00000489406 IFIT5Q13325 482 aaKnown RBP19.23■□□□□ 0.67
UFD1-209ENST00000489406 SCYL3Q8IZE3 742 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 IL27Q8NEV9 243 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 BADQ92934 168 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 NECAB3Q96P71 396 aaPredicted RBP19.23■□□□□ 0.67
UFD1-209ENST00000489406 AGTPBP1Q9UPW5 1226 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 CHMP3Q9Y3E7 222 aa19.23■□□□□ 0.67
UFD1-209ENST00000489406 AK9Q5TCS8 1911 aa19.22■□□□□ 0.67
UFD1-209ENST00000489406 CASP7P55210 303 aa19.22■□□□□ 0.67
UFD1-209ENST00000489406 RTP1P59025 263 aa19.22■□□□□ 0.67
UFD1-209ENST00000489406 TREML2Q5T2D2 321 aa19.22■□□□□ 0.67
UFD1-209ENST00000489406 TRIM75PA6NK02 468 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
UFD1-209ENST00000489406 GCKRQ14397 625 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 ZNF594Q96JF6 807 aaPredicted RBP19.21■□□□□ 0.67
UFD1-209ENST00000489406 MRIQ9BWK5 157 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 PRDM5Q9NQX1 630 aaPredicted RBP19.21■□□□□ 0.67
UFD1-209ENST00000489406 PNMA3Q9UL41 463 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 ATP11BQ9Y2G3 1177 aa19.21■□□□□ 0.67
UFD1-209ENST00000489406 LDHAL6AQ6ZMR3 332 aa19.2■□□□□ 0.66
UFD1-209ENST00000489406 CCDC146Q8IYE0 955 aa19.2■□□□□ 0.66
UFD1-209ENST00000489406 TBC1D22AQ8WUA7 517 aa19.2■□□□□ 0.66
UFD1-209ENST00000489406 CNNM1Q9NRU3 951 aa19.2■□□□□ 0.66
UFD1-209ENST00000489406 PLXNB2O15031 1838 aa19.2■□□□□ 0.66
UFD1-209ENST00000489406 PHF20L1A8MW92 1017 aa19.19■□□□□ 0.66
UFD1-209ENST00000489406 GCLCP48506 637 aaPredicted RBP19.19■□□□□ 0.66
UFD1-209ENST00000489406 NFIAQ12857 509 aa19.19■□□□□ 0.66
UFD1-209ENST00000489406 POTEEQ6S8J3 1075 aa19.19■□□□□ 0.66
UFD1-209ENST00000489406 FRAT2O75474 233 aaPredicted RBP19.18■□□□□ 0.66
UFD1-209ENST00000489406 ZKSCAN1P17029 563 aaPredicted RBP19.18■□□□□ 0.66
UFD1-209ENST00000489406 UBE4AQ14139 1066 aa19.18■□□□□ 0.66
UFD1-209ENST00000489406 CCDC30Q5VVM6 783 aa19.18■□□□□ 0.66
UFD1-209ENST00000489406 CCDC84Q86UT8 332 aaPredicted RBP19.18■□□□□ 0.66
UFD1-209ENST00000489406 RNPC3Q96LT9 517 aaKnown RBP19.18■□□□□ 0.66
UFD1-209ENST00000489406 NUDT12Q9BQG2 462 aa19.18■□□□□ 0.66
UFD1-209ENST00000489406 ZNF576Q9H609 170 aa19.18■□□□□ 0.66
UFD1-209ENST00000489406 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.18■□□□□ 0.66
UFD1-209ENST00000489406 PTPRFP10586 1907 aa19.17■□□□□ 0.66
UFD1-209ENST00000489406 XRCC5P13010 732 aaKnown RBP19.17■□□□□ 0.66
UFD1-209ENST00000489406 DNAJB2P25686 324 aa19.17■□□□□ 0.66
UFD1-209ENST00000489406 CCDC85BQ15834 202 aaPredicted RBP19.17■□□□□ 0.66
UFD1-209ENST00000489406 HHIPL2Q6UWX4 724 aa19.17■□□□□ 0.66
UFD1-209ENST00000489406 VPS37DQ86XT2 251 aa19.17■□□□□ 0.66
UFD1-209ENST00000489406 GAS2L1Q99501 681 aaPredicted RBP19.17■□□□□ 0.66
UFD1-209ENST00000489406 EPHX3Q9H6B9 360 aa19.17■□□□□ 0.66
UFD1-209ENST00000489406 MUC6Q6W4X9 2439 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 FOXO4P98177 505 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 CCL14Q16627 93 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 TAF7LQ5H9L4 462 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 ZFPM1Q8IX07 1006 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 C8orf58Q8NAV2 365 aa19.16■□□□□ 0.66
UFD1-209ENST00000489406 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
UFD1-209ENST00000489406 TRMT44Q8IYL2 757 aaKnown RBP19.15■□□□□ 0.66
UFD1-209ENST00000489406 FAM198AQ9UFP1 575 aa19.15■□□□□ 0.66
UFD1-209ENST00000489406 LRRFIP2Q9Y608 721 aaKnown RBP19.15■□□□□ 0.66
UFD1-209ENST00000489406 MAST3O60307 1309 aa19.15■□□□□ 0.66
UFD1-209ENST00000489406 TCF20Q9UGU0 1960 aaKnown RBP19.14■□□□□ 0.65
UFD1-209ENST00000489406 TMEM31Q5JXX7 168 aa19.14■□□□□ 0.65
UFD1-209ENST00000489406 AKNAD1Q5T1N1 836 aa19.14■□□□□ 0.65
UFD1-209ENST00000489406 FBXO33Q7Z6M2 555 aa19.14■□□□□ 0.65
UFD1-209ENST00000489406 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 SLURP2P0DP57 97 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 SH3RF1Q7Z6J0 888 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 SOCS4Q8WXH5 440 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 ASCC2Q9H1I8 757 aaPredicted RBP19.13■□□□□ 0.65
UFD1-209ENST00000489406 PRDM12Q9H4Q4 367 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 ATRNL1Q5VV63 1379 aa19.13■□□□□ 0.65
UFD1-209ENST00000489406 PEX10O60683 326 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 EPHB4P54760 987 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 CCDC57Q2TAC2 916 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 LMBR1LQ6UX01 489 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 PROCA1Q8NCQ7 364 aaPredicted RBP19.12■□□□□ 0.65
UFD1-209ENST00000489406 TIFAQ96CG3 184 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 MORF4L1Q9UBU8 362 aa19.12■□□□□ 0.65
UFD1-209ENST00000489406 FRMPD3Q5JV73 1810 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.11■□□□□ 0.65
UFD1-209ENST00000489406 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.11■□□□□ 0.65
UFD1-209ENST00000489406 TRIM43BA6NCK2 446 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 PABPC4Q13310 644 aaKnown RBP eCLIP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms