RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NPM3O75607 178 aaKnown RBP17.36■□□□□ 0.37
BRCA1-218ENST00000489037 WDHD1O75717 1129 aaPredicted RBP17.36■□□□□ 0.37
BRCA1-218ENST00000489037 TRPA1O75762 1119 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 TM4SF4P48230 202 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 RHBDL3P58872 404 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 COL13A1Q5TAT6 717 aaPredicted RBP17.36■□□□□ 0.37
BRCA1-218ENST00000489037 CERS3Q8IU89 383 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 RNF186Q9NXI6 227 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
BRCA1-218ENST00000489037 TSKSQ9UJT2 592 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 NDUFB9Q9Y6M9 179 aa17.36■□□□□ 0.37
BRCA1-218ENST00000489037 CASP8AP2Q9UKL3 1982 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 ATP5JP18859 108 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 PPP4CP60510 307 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 VGLL4Q14135 290 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 OTUD7BQ6GQQ9 843 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.35■□□□□ 0.37
BRCA1-218ENST00000489037 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 MAGEB6Q8N7X4 407 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 OPTNQ96CV9 577 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
BRCA1-218ENST00000489037 GOLIM4O00461 696 aa17.34■□□□□ 0.37
BRCA1-218ENST00000489037 ALDH1A1P00352 501 aa17.34■□□□□ 0.37
BRCA1-218ENST00000489037 SH3RF3Q8TEJ3 882 aaPredicted RBP17.34■□□□□ 0.37
BRCA1-218ENST00000489037 ANTXR1Q9H6X2 564 aa17.34■□□□□ 0.37
BRCA1-218ENST00000489037 DDX4Q9NQI0 724 aaKnown RBP17.34■□□□□ 0.37
BRCA1-218ENST00000489037 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
BRCA1-218ENST00000489037 ERO1BQ86YB8 467 aa17.33■□□□□ 0.36
BRCA1-218ENST00000489037 TNS4Q8IZW8 715 aa17.33■□□□□ 0.36
BRCA1-218ENST00000489037 ZKSCAN4Q969J2 545 aaPredicted RBP17.33■□□□□ 0.36
BRCA1-218ENST00000489037 ECHDC1Q9NTX5 307 aa17.33■□□□□ 0.36
BRCA1-218ENST00000489037 PAG1Q9NWQ8 432 aa17.33■□□□□ 0.36
BRCA1-218ENST00000489037 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.36
BRCA1-218ENST00000489037 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
BRCA1-218ENST00000489037 SLC9C2Q5TAH2 1124 aa17.32■□□□□ 0.36
BRCA1-218ENST00000489037 TGFBRAP1Q8WUH2 860 aa17.32■□□□□ 0.36
BRCA1-218ENST00000489037 OTUD5Q96G74 571 aa17.32■□□□□ 0.36
BRCA1-218ENST00000489037 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.32■□□□□ 0.36
BRCA1-218ENST00000489037 OSBPL5Q9H0X9 879 aaPredicted RBP17.32■□□□□ 0.36
BRCA1-218ENST00000489037 ZNF112Q9UJU3 913 aa17.32■□□□□ 0.36
BRCA1-218ENST00000489037 CDK5RAP2Q96SN8 1893 aa17.32■□□□□ 0.36
BRCA1-218ENST00000489037 MYH7P12883 1935 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 SPDYE5A6NIY4 337 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 USP5P45974 858 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 GTF2A2P52657 109 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 ADGRA1Q86SQ6 560 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 MIGA1Q8NAN2 632 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 HAUS7Q99871 368 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 DHX36Q9H2U1 1008 aaKnown RBP17.31■□□□□ 0.36
BRCA1-218ENST00000489037 SNCAIPQ9Y6H5 919 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 MYH1P12882 1939 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 FOCADQ5VW36 1801 aa17.31■□□□□ 0.36
BRCA1-218ENST00000489037 LAMB1P07942 1786 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 INPP5BP32019 993 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
BRCA1-218ENST00000489037 PPATQ06203 517 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
BRCA1-218ENST00000489037 ZSCAN25Q6NSZ9 544 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 IFNL1Q8IU54 200 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 MAPKAPK5Q8IW41 473 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 TRIM34Q9BYJ4 488 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 RWDD1Q9H446 243 aaPredicted RBP17.3■□□□□ 0.36
BRCA1-218ENST00000489037 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.36
BRCA1-218ENST00000489037 PICK1Q9NRD5 415 aa17.3■□□□□ 0.36
BRCA1-218ENST00000489037 COL2A1P02458 1487 aaPredicted RBP17.3■□□□□ 0.36
BRCA1-218ENST00000489037 MAGEB6P1A0A0J9YX57 407 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 TBC1D12O60347 775 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 PDE6AP16499 860 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 GJA5P36382 358 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 PPIL2Q13356 520 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 NOL9Q5SY16 702 aaKnown RBP17.29■□□□□ 0.36
BRCA1-218ENST00000489037 PI4KBQ9UBF8 816 aa17.29■□□□□ 0.36
BRCA1-218ENST00000489037 CCL15-CCL14A0A0B4J2E2 113 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 ERC2O15083 957 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 HLA-DOAP06340 250 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 CETPP11597 493 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 MAP3K10Q02779 954 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 SNAPC2Q13487 334 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 CCL15Q16663 113 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
BRCA1-218ENST00000489037 EDC3Q96F86 508 aaKnown RBP17.28■□□□□ 0.36
BRCA1-218ENST00000489037 HERC5Q9UII4 1024 aaKnown RBP17.28■□□□□ 0.36
BRCA1-218ENST00000489037 FLT1P17948 1338 aa17.27■□□□□ 0.36
BRCA1-218ENST00000489037 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
BRCA1-218ENST00000489037 ZNF532Q9HCE3 1301 aa17.27■□□□□ 0.36
BRCA1-218ENST00000489037 TESPA1A2RU30 521 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-218ENST00000489037 CTNND1O60716 968 aaKnown RBP17.27■□□□□ 0.36
BRCA1-218ENST00000489037 FOXP4Q8IVH2 680 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-218ENST00000489037 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
BRCA1-218ENST00000489037 CRACR2BQ8N4Y2 399 aaPredicted RBP17.27■□□□□ 0.36
BRCA1-218ENST00000489037 EXOC6Q8TAG9 804 aa17.27■□□□□ 0.36
BRCA1-218ENST00000489037 CRNKL1Q9BZJ0 848 aaKnown RBP17.27■□□□□ 0.36
BRCA1-218ENST00000489037 PHF20L1A8MW92 1017 aa17.26■□□□□ 0.35
BRCA1-218ENST00000489037 IRF6O14896 467 aa17.26■□□□□ 0.35
BRCA1-218ENST00000489037 LRRFIP1Q32MZ4 808 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms