RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 CERS3Q8IU89 383 aa18.3■□□□□ 0.52
FDPS-213ENST00000489003 FKBP1BP68106 108 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
FDPS-213ENST00000489003 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
FDPS-213ENST00000489003 SKAP1Q86WV1 359 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 MAPKAPK5Q8IW41 473 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 LCORLQ8N3X6 602 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 OSBP2Q969R2 916 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 RILPL2Q969X0 211 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
FDPS-213ENST00000489003 ARMT1Q9H993 441 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
FDPS-213ENST00000489003 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
FDPS-213ENST00000489003 MBD4O95243 580 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 HUNKP57058 714 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 TTC22Q5TAA0 569 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 MIGA2Q7L4E1 593 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 ZSCAN29Q8IWY8 852 aaPredicted RBP18.28■□□□□ 0.52
FDPS-213ENST00000489003 DNAJC5GQ8N7S2 189 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 APPBP2Q92624 585 aa18.28■□□□□ 0.52
FDPS-213ENST00000489003 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
FDPS-213ENST00000489003 RASSF10A6NK89 507 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 USP5P45974 858 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 MAP3K11Q16584 847 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 ZMYM1Q5SVZ6 1142 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
FDPS-213ENST00000489003 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
FDPS-213ENST00000489003 FOCADQ5VW36 1801 aa18.27■□□□□ 0.52
FDPS-213ENST00000489003 RPAP1Q9BWH6 1393 aaPredicted RBP18.27■□□□□ 0.51
FDPS-213ENST00000489003 PRKAB2O43741 272 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 SLURP2P0DP57 97 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 GSPT1P15170 499 aaKnown RBP18.26■□□□□ 0.51
FDPS-213ENST00000489003 MAP3K10Q02779 954 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 LDLRAD1Q5T700 205 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 AIDAQ96BJ3 306 aa18.26■□□□□ 0.51
FDPS-213ENST00000489003 CRNKL1Q9BZJ0 848 aaKnown RBP18.26■□□□□ 0.51
FDPS-213ENST00000489003 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
FDPS-213ENST00000489003 FLT1P17948 1338 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 M0R2C6 588 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 SDSP20132 328 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 SDR42E1Q8WUS8 393 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 KLRG1Q96E93 195 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 HOOK2Q96ED9 719 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 HHIPL1Q96JK4 782 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 CSRNP1Q96S65 589 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 PALD1Q9ULE6 856 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 ATRNL1Q5VV63 1379 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 MYH1P12882 1939 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 PAPPA2Q9BXP8 1791 aa18.25■□□□□ 0.51
FDPS-213ENST00000489003 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
FDPS-213ENST00000489003 MAP3K9P80192 1104 aa18.24■□□□□ 0.51
FDPS-213ENST00000489003 DCAF15Q66K64 600 aa18.24■□□□□ 0.51
FDPS-213ENST00000489003 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
FDPS-213ENST00000489003 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
FDPS-213ENST00000489003 SAP30BPQ9UHR5 308 aaKnown RBP18.24■□□□□ 0.51
FDPS-213ENST00000489003 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
FDPS-213ENST00000489003 CYP4F22Q6NT55 531 aa18.23■□□□□ 0.51
FDPS-213ENST00000489003 FOXP4Q8IVH2 680 aaPredicted RBP18.23■□□□□ 0.51
FDPS-213ENST00000489003 ZNF341Q9BYN7 854 aa18.23■□□□□ 0.51
FDPS-213ENST00000489003 DHX36Q9H2U1 1008 aaKnown RBP18.23■□□□□ 0.51
FDPS-213ENST00000489003 HELLSQ9NRZ9 838 aa18.23■□□□□ 0.51
FDPS-213ENST00000489003 PI4KBQ9UBF8 816 aa18.23■□□□□ 0.51
FDPS-213ENST00000489003 ZNF112Q9UJU3 913 aa18.23■□□□□ 0.51
FDPS-213ENST00000489003 COL2A1P02458 1487 aaPredicted RBP18.22■□□□□ 0.51
FDPS-213ENST00000489003 UNCXA6NJT0 531 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 GPAA1O43292 621 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 TBC1D12O60347 775 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 VEGFBP49765 207 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.22■□□□□ 0.51
FDPS-213ENST00000489003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.22■□□□□ 0.51
FDPS-213ENST00000489003 FAM227BQ96M60 508 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 ATP8A2Q9NTI2 1148 aa18.22■□□□□ 0.51
FDPS-213ENST00000489003 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 PHF20L1A8MW92 1017 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 PLCD1P51178 756 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 ZNF157P51786 506 aaPredicted RBP18.21■□□□□ 0.51
FDPS-213ENST00000489003 NMIQ13287 307 aaPredicted RBP18.21■□□□□ 0.51
FDPS-213ENST00000489003 MCMDC2Q4G0Z9 681 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 CCDC129Q6ZRS4 1044 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 ANKRD13AQ8IZ07 590 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 SLC10A4Q96EP9 437 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 CLMNQ96JQ2 1002 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
FDPS-213ENST00000489003 BAZ2AQ9UIF9 1905 aaKnown RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 A0A0D9SFI3 127 aa18.2■□□□□ 0.5
FDPS-213ENST00000489003 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 SLC4A8Q2Y0W8 1093 aa18.2■□□□□ 0.5
FDPS-213ENST00000489003 PAXIP1Q6ZW49 1069 aaPredicted RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 TTC6Q86TZ1 520 aa18.2■□□□□ 0.5
FDPS-213ENST00000489003 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 ZKSCAN4Q969J2 545 aaPredicted RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 CCDC102AQ96A19 550 aa18.2■□□□□ 0.5
FDPS-213ENST00000489003 MCM9Q9NXL9 1143 aa18.2■□□□□ 0.5
FDPS-213ENST00000489003 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 WDR33Q9C0J8 1336 aaKnown RBP18.2■□□□□ 0.5
FDPS-213ENST00000489003 FAM196BA6NMK8 535 aa18.19■□□□□ 0.5
FDPS-213ENST00000489003 FAM155AB1AL88 458 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms