RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 FBXO38Q6PIJ6 1188 aa8.83□□□□□ -1
BEST3-205ENST00000488961 GRAMD1CQ8IYS0 662 aa8.83□□□□□ -1
BEST3-205ENST00000488961 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
BEST3-205ENST00000488961 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
BEST3-205ENST00000488961 ZNF397Q8NF99 534 aaPredicted RBP8.83□□□□□ -1
BEST3-205ENST00000488961 SLC26A6Q9BXS9 759 aa8.83□□□□□ -1
BEST3-205ENST00000488961 RAI14Q9P0K7 980 aa8.83□□□□□ -1
BEST3-205ENST00000488961 JRKLQ9Y4A0 524 aa8.83□□□□□ -1
BEST3-205ENST00000488961 ITGB4P16144 1822 aa8.82□□□□□ -1
BEST3-205ENST00000488961 EPB41L2O43491 1005 aaKnown RBP8.82□□□□□ -1
BEST3-205ENST00000488961 CASP1P29466 404 aa8.82□□□□□ -1
BEST3-205ENST00000488961 TDO2P48775 406 aa8.82□□□□□ -1
BEST3-205ENST00000488961 CTR9Q6PD62 1173 aa8.82□□□□□ -1
BEST3-205ENST00000488961 FAM53CQ9NYF3 392 aa8.82□□□□□ -1
BEST3-205ENST00000488961 NWD2Q9ULI1 1742 aa8.82□□□□□ -1
BEST3-205ENST00000488961 GOLGA6L6A8MZA4 724 aa8.82□□□□□ -1
BEST3-205ENST00000488961 SYCP1Q15431 976 aa8.82□□□□□ -1
BEST3-205ENST00000488961 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
BEST3-205ENST00000488961 APPBP2Q92624 585 aa8.82□□□□□ -1
BEST3-205ENST00000488961 MYH14Q7Z406 1995 aaKnown RBP8.82□□□□□ -1
BEST3-205ENST00000488961 LOC102724428A0A0B4J2F2 783 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SMTNL1A8MU46 457 aa8.81□□□□□ -1
BEST3-205ENST00000488961 IFIT3O14879 490 aaKnown RBP8.81□□□□□ -1
BEST3-205ENST00000488961 POLR3GO15318 223 aaPredicted RBP8.81□□□□□ -1
BEST3-205ENST00000488961 SIK1P57059 783 aa8.81□□□□□ -1
BEST3-205ENST00000488961 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
BEST3-205ENST00000488961 ZNF827Q17R98 1081 aa8.81□□□□□ -1
BEST3-205ENST00000488961 TMEM67Q5HYA8 995 aa8.81□□□□□ -1
BEST3-205ENST00000488961 INTS5Q6P9B9 1019 aaKnown RBP8.81□□□□□ -1
BEST3-205ENST00000488961 SPATA5Q8NB90 893 aa8.81□□□□□ -1
BEST3-205ENST00000488961 STAMQ92783 540 aa8.81□□□□□ -1
BEST3-205ENST00000488961 DSCC1Q9BVC3 393 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SCAND2PQ9GZW5 306 aaPredicted RBP8.81□□□□□ -1
BEST3-205ENST00000488961 NAPBQ9H115 298 aa8.81□□□□□ -1
BEST3-205ENST00000488961 BRMS1Q9HCU9 246 aa8.81□□□□□ -1
BEST3-205ENST00000488961 ZSWIM5Q9P217 1185 aa8.81□□□□□ -1
BEST3-205ENST00000488961 AKAP2Q9Y2D5 859 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SLC4A4Q9Y6R1 1079 aa8.81□□□□□ -1
BEST3-205ENST00000488961 PKD1L3Q7Z443 1732 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SLIT2O94813 1529 aa8.81□□□□□ -1
BEST3-205ENST00000488961 NUP188Q5SRE5 1749 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SHANK3Q9BYB0 1731 aa8.81□□□□□ -1
BEST3-205ENST00000488961 USP27XA6NNY8 438 aa8.81□□□□□ -1
BEST3-205ENST00000488961 CSF1RP07333 972 aa8.81□□□□□ -1
BEST3-205ENST00000488961 ADD2P35612 726 aa8.81□□□□□ -1
BEST3-205ENST00000488961 METAP2P50579 478 aaKnown RBP eCLIP8.81□□□□□ -1
BEST3-205ENST00000488961 TRDNQ13061 729 aa8.81□□□□□ -1
BEST3-205ENST00000488961 SEMA3FQ13275 785 aa8.81□□□□□ -1
BEST3-205ENST00000488961 NR5A1Q13285 461 aa8.81□□□□□ -1
BEST3-205ENST00000488961 RASGRP2Q7LDG7 609 aa8.81□□□□□ -1
BEST3-205ENST00000488961 MB21D2Q8IYB1 491 aaPredicted RBP8.81□□□□□ -1
BEST3-205ENST00000488961 CCDC112Q8NEF3 446 aa8.81□□□□□ -1
BEST3-205ENST00000488961 NCOA7Q8NI08 942 aa8.81□□□□□ -1
BEST3-205ENST00000488961 CELF1Q92879 486 aaKnown RBP8.81□□□□□ -1
BEST3-205ENST00000488961 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
BEST3-205ENST00000488961 MRC1P22897 1456 aa8.81□□□□□ -1
BEST3-205ENST00000488961 STRCQ7RTU9 1775 aa8.8□□□□□ -1
BEST3-205ENST00000488961 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
BEST3-205ENST00000488961 BAZ2AQ9UIF9 1905 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 RANBP6O60518 1105 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 PDE8AO60658 829 aa8.8□□□□□ -1
BEST3-205ENST00000488961 WDHD1O75717 1129 aaPredicted RBP8.8□□□□□ -1
BEST3-205ENST00000488961 CHRNDQ07001 517 aa8.8□□□□□ -1
BEST3-205ENST00000488961 BMS1Q14692 1282 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 DPCR1Q3MIW9 517 aa8.8□□□□□ -1
BEST3-205ENST00000488961 CCDC73Q6ZRK6 1079 aa8.8□□□□□ -1
BEST3-205ENST00000488961 UIMC1Q96RL1 719 aa8.8□□□□□ -1
BEST3-205ENST00000488961 ALG1Q9BT22 464 aa8.8□□□□□ -1
BEST3-205ENST00000488961 CLSTN2Q9H4D0 955 aa8.8□□□□□ -1
BEST3-205ENST00000488961 CXorf56Q9H5V9 222 aa8.8□□□□□ -1
BEST3-205ENST00000488961 SUFUQ9UMX1 484 aa8.8□□□□□ -1
BEST3-205ENST00000488961 NUP98P52948 1817 aa8.8□□□□□ -1
BEST3-205ENST00000488961 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 AKAP11Q9UKA4 1901 aa8.8□□□□□ -1
BEST3-205ENST00000488961 BECN2A8MW95 431 aa8.8□□□□□ -1
BEST3-205ENST00000488961 KINO60870 393 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 SNW1Q13573 536 aaKnown RBP8.8□□□□□ -1
BEST3-205ENST00000488961 ELF2Q15723 593 aa8.8□□□□□ -1
BEST3-205ENST00000488961 FAM47AQ5JRC9 791 aa8.8□□□□□ -1
BEST3-205ENST00000488961 PACS2Q86VP3 889 aa8.8□□□□□ -1
BEST3-205ENST00000488961 VPS37DQ86XT2 251 aa8.8□□□□□ -1
BEST3-205ENST00000488961 CREBRFQ8IUR6 639 aa8.8□□□□□ -1
BEST3-205ENST00000488961 VGLL2Q8N8G2 317 aa8.8□□□□□ -1
BEST3-205ENST00000488961 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
BEST3-205ENST00000488961 FAM200AQ8TCP9 573 aa8.8□□□□□ -1
BEST3-205ENST00000488961 SGSM3Q96HU1 749 aa8.8□□□□□ -1
BEST3-205ENST00000488961 DONSONQ9NYP3 566 aa8.8□□□□□ -1
BEST3-205ENST00000488961 MYH2Q9UKX2 1941 aa8.8□□□□□ -1
BEST3-205ENST00000488961 CYP2D6P10635 497 aa8.79□□□□□ -1
BEST3-205ENST00000488961 VEGFAP15692 232 aaPredicted RBP8.79□□□□□ -1
BEST3-205ENST00000488961 CYP7A1P22680 504 aa8.79□□□□□ -1
BEST3-205ENST00000488961 LMOD1P29536 600 aaPredicted RBP8.79□□□□□ -1
BEST3-205ENST00000488961 ST5P78524 1137 aa8.79□□□□□ -1
BEST3-205ENST00000488961 PNOCQ13519 176 aa8.79□□□□□ -1
BEST3-205ENST00000488961 TXNRD3Q86VQ6 643 aa8.79□□□□□ -1
BEST3-205ENST00000488961 IFNL3Q8IZI9 196 aa8.79□□□□□ -1
BEST3-205ENST00000488961 OXER1Q8TDS5 423 aa8.79□□□□□ -1
BEST3-205ENST00000488961 ZNF526Q8TF50 670 aaPredicted RBP8.79□□□□□ -1
BEST3-205ENST00000488961 CLIP2Q9UDT6 1046 aa8.79□□□□□ -1
BEST3-205ENST00000488961 GOLGA8AA7E2F4 631 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms