RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 SLC43A3Q8NBI5 491 aa4.9□□□□□ -1.63
PRPF4-203ENST00000488937 C2CD4AQ8NCU7 369 aaPredicted RBP4.9□□□□□ -1.63
PRPF4-203ENST00000488937 HELQQ8TDG4 1101 aa4.9□□□□□ -1.63
PRPF4-203ENST00000488937 ARMC5Q96C12 935 aa4.9□□□□□ -1.63
PRPF4-203ENST00000488937 LNPKQ9C0E8 428 aa4.9□□□□□ -1.63
PRPF4-203ENST00000488937 LOC100289279A0A1B0GTE1 492 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 AKAP8O43823 692 aaKnown RBP4.89□□□□□ -1.63
PRPF4-203ENST00000488937 NUAK1O60285 661 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 MED14OSP0DP75 135 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 NPR3P17342 541 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 SOX4Q06945 474 aaPredicted RBP4.89□□□□□ -1.63
PRPF4-203ENST00000488937 METTL16Q86W50 562 aaKnown RBP4.89□□□□□ -1.63
PRPF4-203ENST00000488937 ABTB2Q8N961 1025 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 BSNDQ8WZ55 320 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 PMEPA1Q969W9 287 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 ACSS3Q9H6R3 686 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 STIM2Q9P246 746 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 DCTN4Q9UJW0 460 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 SOX13Q9UN79 622 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 CNTNAP4Q9C0A0 1308 aa4.89□□□□□ -1.63
PRPF4-203ENST00000488937 TLDC2A0PJX2 215 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 MARCH6O60337 910 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 ZAP70P43403 619 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 CYP27C1Q4G0S4 372 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 EGFLAMQ63HQ2 1017 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 ATG14Q6ZNE5 492 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 GTF3C2Q8WUA4 911 aaPredicted RBP4.88□□□□□ -1.63
PRPF4-203ENST00000488937 ZFYVE1Q9HBF4 777 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 VAV3Q9UKW4 847 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 BRPF3Q9ULD4 1205 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
PRPF4-203ENST00000488937 SBNO2Q9Y2G9 1366 aa4.88□□□□□ -1.63
PRPF4-203ENST00000488937 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.87□□□□□ -1.63
PRPF4-203ENST00000488937 H3BRB1 525 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 ZBTB39O15060 712 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 DRD2P14416 443 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 BMP7P18075 431 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 MAPK1P28482 360 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 ARHGAP4P98171 946 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 SLC23A3Q6PIS1 610 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 ZNF438Q7Z4V0 828 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 TMEM102Q8N9M5 508 aaPredicted RBP4.87□□□□□ -1.63
PRPF4-203ENST00000488937 GMLQ99445 158 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 TANGO6Q9C0B7 1094 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 BCL11AQ9H165 835 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 TUT1Q9H6E5 874 aaKnown RBP4.87□□□□□ -1.63
PRPF4-203ENST00000488937 ELP3Q9H9T3 547 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 DZANK1Q9NVP4 752 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 NLRP2Q9NX02 1062 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 SALL4Q9UJQ4 1053 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 TBX22Q9Y458 520 aa4.87□□□□□ -1.63
PRPF4-203ENST00000488937 ARID4BQ4LE39 1312 aaPredicted RBP4.87□□□□□ -1.63
PRPF4-203ENST00000488937 TCAF2A6NFQ2 919 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 CYP2E1P05181 493 aaPredicted RBP4.86□□□□□ -1.63
PRPF4-203ENST00000488937 GLI1P08151 1106 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 CELA3BP08861 270 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 ADH5P11766 374 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 CES1P23141 567 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 PRKCQQ04759 706 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 EAPPQ56P03 285 aaPredicted RBP4.86□□□□□ -1.63
PRPF4-203ENST00000488937 MPZL3Q6UWV2 235 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 NOL8Q76FK4 1167 aaKnown RBP4.86□□□□□ -1.63
PRPF4-203ENST00000488937 ZSCAN29Q8IWY8 852 aaPredicted RBP4.86□□□□□ -1.63
PRPF4-203ENST00000488937 GPR152Q8TDT2 470 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 MICAL1Q8TDZ2 1067 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 GPATCH3Q96I76 525 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 KCNC2Q96PR1 638 aa4.86□□□□□ -1.63
PRPF4-203ENST00000488937 DNAJC2Q99543 621 aaKnown RBP4.86□□□□□ -1.63
PRPF4-203ENST00000488937 NFKBIEO00221 500 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
PRPF4-203ENST00000488937 RAB11FIP3O75154 756 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 PCSK2P16519 638 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 RAB6AP20340 208 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 LINC00310P59036 64 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 FKBP4Q02790 459 aaKnown RBP eCLIP4.85□□□□□ -1.63
PRPF4-203ENST00000488937 ZNF211Q13398 564 aaPredicted RBP4.85□□□□□ -1.63
PRPF4-203ENST00000488937 SF3B2Q13435 895 aaKnown RBP4.85□□□□□ -1.63
PRPF4-203ENST00000488937 SDE2Q6IQ49 451 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 OGFOD3Q6PK18 319 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 TTC16Q8NEE8 873 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 NETO1Q8TDF5 533 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 TGIF2Q9GZN2 237 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 METTL5Q9NRN9 209 aaKnown RBP4.85□□□□□ -1.63
PRPF4-203ENST00000488937 KANSL3Q9P2N6 904 aa4.85□□□□□ -1.63
PRPF4-203ENST00000488937 PLEKHD1A6NEE1 506 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 P4HBP07237 508 aaKnown RBP4.84□□□□□ -1.63
PRPF4-203ENST00000488937 NFICP08651 508 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 GLDCP23378 1020 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 MPSTP25325 297 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 RBL2Q08999 1139 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 MTMR3Q13615 1198 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 CCDC144BQ3MJ40 725 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 C9orf131Q5VYM1 1079 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 NT5DC4Q86YG4 428 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 GLYCTKQ8IVS8 523 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 NLGN1Q8N2Q7 840 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 SEMA6CQ9H3T2 930 aa4.84□□□□□ -1.63
PRPF4-203ENST00000488937 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.84□□□□□ -1.63
PRPF4-203ENST00000488937 SMG5Q9UPR3 1016 aaKnown RBP4.84□□□□□ -1.63
PRPF4-203ENST00000488937 ACTL7BQ9Y614 415 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms