RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 YY1P25490 414 aa14.72□□□□□ -0.05
TRAIP-209ENST00000488860 PNMA8AQ86V59 439 aaPredicted RBP14.72□□□□□ -0.05
TRAIP-209ENST00000488860 APOBEC3FQ8IUX4 373 aaKnown RBP14.72□□□□□ -0.05
TRAIP-209ENST00000488860 DSCC1Q9BVC3 393 aa14.72□□□□□ -0.05
TRAIP-209ENST00000488860 NACAP1Q9BZK3 213 aa14.72□□□□□ -0.05
TRAIP-209ENST00000488860 LSG1Q9H089 658 aaKnown RBP14.72□□□□□ -0.05
TRAIP-209ENST00000488860 GPBP1L1Q9HC44 474 aaPredicted RBP14.72□□□□□ -0.05
TRAIP-209ENST00000488860 FOXP2O15409 715 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 SEC24BO95487 1268 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 TNNI2P48788 182 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 TNFAIP1Q13829 316 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.05
TRAIP-209ENST00000488860 AMOTL1Q8IY63 956 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 IFNL3Q8IZI9 196 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 DCPSQ96C86 337 aaKnown RBP14.71□□□□□ -0.05
TRAIP-209ENST00000488860 IDI2Q9BXS1 227 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 OSBPL5Q9H0X9 879 aaPredicted RBP14.71□□□□□ -0.05
TRAIP-209ENST00000488860 DCP1AQ9NPI6 582 aaPredicted RBP14.71□□□□□ -0.05
TRAIP-209ENST00000488860 ATP8A2Q9NTI2 1148 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 FAM198AQ9UFP1 575 aa14.71□□□□□ -0.05
TRAIP-209ENST00000488860 CNTNAP1P78357 1384 aa14.71□□□□□ -0.06
TRAIP-209ENST00000488860 RPAP1Q9BWH6 1393 aaPredicted RBP14.71□□□□□ -0.06
TRAIP-209ENST00000488860 ATAD5Q96QE3 1844 aa14.71□□□□□ -0.06
TRAIP-209ENST00000488860 EIF5BO60841 1220 aaKnown RBP14.7□□□□□ -0.06
TRAIP-209ENST00000488860 POTEIP0CG38 1075 aa14.7□□□□□ -0.06
TRAIP-209ENST00000488860 POTEJP0CG39 1038 aa14.7□□□□□ -0.06
TRAIP-209ENST00000488860 RBM8AQ9Y5S9 174 aaKnown RBP14.7□□□□□ -0.06
TRAIP-209ENST00000488860 TRPM7Q96QT4 1865 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 PITPNM2Q9BZ72 1349 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 MINDY4BA8MYZ0 360 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 ENTPD3O75355 529 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 POLR3DP05423 398 aaPredicted RBP14.69□□□□□ -0.06
TRAIP-209ENST00000488860 CYP2D6P10635 497 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 ZFPM1Q8IX07 1006 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 STK11IPQ8N1F8 1099 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 BACH2Q9BYV9 841 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 TMEM39BQ9GZU3 492 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 ARPP21Q9UBL0 812 aaPredicted RBP14.69□□□□□ -0.06
TRAIP-209ENST00000488860 PALD1Q9ULE6 856 aa14.69□□□□□ -0.06
TRAIP-209ENST00000488860 U3KPZ7 1027 aaPredicted RBP14.69□□□□□ -0.06
TRAIP-209ENST00000488860 COL2A1P02458 1487 aaPredicted RBP14.69□□□□□ -0.06
TRAIP-209ENST00000488860 ZMYM6O95789 1325 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 CYP2D7A0A087X1C5 515 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 ADM5C9JUS6 153 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 FGAP02671 866 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 HLA-DOAP06340 250 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 HAND2P61296 217 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 RASA3Q14644 834 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 FKBP1CQ5VVH2 108 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 GIMAP6Q6P9H5 292 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 CTR9Q6PD62 1173 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 FAM83AQ86UY5 434 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 LDHDQ86WU2 507 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 SULF1Q8IWU6 871 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 FAM151AQ8WW52 585 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 MAP4K1Q92918 833 aa14.68□□□□□ -0.06
TRAIP-209ENST00000488860 OTOFQ9HC10 1997 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 USP17L12C9JPN9 530 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 USP17L21D6R901 530 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 MCCP23508 829 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 EVX2Q03828 476 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 ALX1Q15699 326 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 MAP1SQ66K74 1059 aaPredicted RBP14.67□□□□□ -0.06
TRAIP-209ENST00000488860 KRT26Q7Z3Y9 468 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 ZC3H15Q8WU90 426 aaKnown RBP14.67□□□□□ -0.06
TRAIP-209ENST00000488860 DEFB129Q9H1M3 183 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 UPF2Q9HAU5 1272 aaKnown RBP14.67□□□□□ -0.06
TRAIP-209ENST00000488860 MKRN1Q9UHC7 482 aaKnown RBP14.67□□□□□ -0.06
TRAIP-209ENST00000488860 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
TRAIP-209ENST00000488860 ATRNL1Q5VV63 1379 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 DDTLA6NHG4 134 aaPredicted RBP14.66□□□□□ -0.06
TRAIP-209ENST00000488860 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
TRAIP-209ENST00000488860 CTDSPL2Q05D32 466 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 PPARAQ07869 468 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 IMMTQ16891 758 aaKnown RBP14.66□□□□□ -0.06
TRAIP-209ENST00000488860 PRAMEF18Q5VWM3 479 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 SH3BP5LQ7L8J4 393 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 USP48Q86UV5 1035 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 CDAN1Q8IWY9 1227 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 CSRNP1Q96S65 589 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 TRIM34Q9BYJ4 488 aa14.66□□□□□ -0.06
TRAIP-209ENST00000488860 GLIS2Q9BZE0 524 aaPredicted RBP14.66□□□□□ -0.06
TRAIP-209ENST00000488860 DOCK1Q14185 1865 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 SMIM22K7EJ46 135 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 ZNF213O14771 459 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 PLCD1P51178 756 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 CREB3L3Q68CJ9 461 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 TTC6Q86TZ1 520 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 CRACR2BQ8N4Y2 399 aaPredicted RBP14.65□□□□□ -0.06
TRAIP-209ENST00000488860 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 DHX36Q9H2U1 1008 aaKnown RBP14.65□□□□□ -0.06
TRAIP-209ENST00000488860 PPP2R3BQ9Y5P8 575 aa14.65□□□□□ -0.06
TRAIP-209ENST00000488860 ROBO3Q96MS0 1386 aa14.64□□□□□ -0.07
TRAIP-209ENST00000488860 FAM196BA6NMK8 535 aa14.64□□□□□ -0.07
TRAIP-209ENST00000488860 SLC27A2O14975 620 aa14.64□□□□□ -0.07
TRAIP-209ENST00000488860 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
TRAIP-209ENST00000488860 SBK1Q52WX2 424 aa14.64□□□□□ -0.07
TRAIP-209ENST00000488860 C12orf60Q5U649 245 aa14.64□□□□□ -0.07
TRAIP-209ENST00000488860 RNF20Q5VTR2 975 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms