RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 LAMA4Q16363 1823 aa7.96□□□□□ -1.13
PTPRD-212ENST00000488774 FOXP2O15409 715 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 IDH1O75874 414 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 IFIT2P09913 472 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 PDE6AP16499 860 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 INPP5BP32019 993 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 CAP1Q01518 475 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 PICALMQ13492 652 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 DZIP1Q86YF9 867 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 APOBEC3FQ8IUX4 373 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 LCORLQ8N3X6 602 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 NKX2-3Q8TAU0 364 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 SEC62Q99442 399 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 RIOK1Q9BRS2 568 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 R3HDMLQ9H3Y0 253 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 LRP2BPQ9P2M1 347 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.14
PTPRD-212ENST00000488774 SMCHD1A6NHR9 2005 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 ZNF532Q9HCE3 1301 aa7.96□□□□□ -1.14
PTPRD-212ENST00000488774 COL11A1P12107 1806 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 PHF20L1A8MW92 1017 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 FOXN1O15353 648 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 SLC10A3P09131 477 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 CYP2D6P10635 497 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 CYP7A1P22680 504 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 ADD2P35612 726 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 NUCB1Q02818 461 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 DGKZQ13574 1117 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 HSP90AB4PQ58FF6 505 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 NAA16Q6N069 864 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 MAPKAPK5Q8IW41 473 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 PLEKHM2Q8IWE5 1019 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 ZKSCAN4Q969J2 545 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 IDI2Q9BXS1 227 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 PUS7LQ9H0K6 701 aaKnown RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 IL25Q9H293 177 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 PAG1Q9NWQ8 432 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 SAP30BPQ9UHR5 308 aaKnown RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 TACC3Q9Y6A5 838 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 SNCAIPQ9Y6H5 919 aa7.95□□□□□ -1.14
PTPRD-212ENST00000488774 MKI67P46013 3256 aaKnown RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 RPAP1Q9BWH6 1393 aaPredicted RBP7.95□□□□□ -1.14
PTPRD-212ENST00000488774 CYP2D7A0A087X1C5 515 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 M0R2C6 588 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 PDE1AP54750 535 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 PPP4CP60510 307 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 VGLL4Q14135 290 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 MAP3K11Q16584 847 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 FKBP1CQ5VVH2 108 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 RGMBQ6NW40 437 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 FAM83AQ86UY5 434 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 TGFBRAP1Q8WUH2 860 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 SDR42E1Q8WUS8 393 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 FAM151AQ8WW52 585 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 OSBP2Q969R2 916 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 CSRNP1Q96S65 589 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 ARMT1Q9H993 441 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 ECHDC1Q9NTX5 307 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 FOXD4L1Q9NU39 408 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 STAP2Q9UGK3 403 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 PALD1Q9ULE6 856 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 MAST3O60307 1309 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 FLT1P17948 1338 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 PLXNB2O15031 1838 aa7.94□□□□□ -1.14
PTPRD-212ENST00000488774 HSPA1AP0DMV8 641 aaKnown RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 HSPA1BP0DMV9 641 aaKnown RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 GSPT1P15170 499 aaKnown RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 MX1P20591 662 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 MMP14P50281 582 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 PLCD1P51178 756 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 KIF23Q02241 960 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 MAP3K10Q02779 954 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 MOGSQ13724 837 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 SLC9C2Q5TAH2 1124 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 SPTY2D1Q68D10 685 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 CCDC129Q6ZRS4 1044 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 PAXIP1Q6ZW49 1069 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 CHD1LQ86WJ1 897 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 TEX11Q8IYF3 940 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 C2orf69Q8N8R5 385 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 PTPN18Q99952 460 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 OSBPL5Q9H0X9 879 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 CHMP4BQ9H444 224 aaKnown RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 ELP3Q9H9T3 547 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 EPB41L4AQ9HCS5 686 aaPredicted RBP7.93□□□□□ -1.14
PTPRD-212ENST00000488774 WBP1LQ9NX94 342 aa7.93□□□□□ -1.14
PTPRD-212ENST00000488774 IGF2BP3O00425 579 aaKnown RBP eCLIP7.92□□□□□ -1.14
PTPRD-212ENST00000488774 MYO1BO43795 1136 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 MBD4O95243 580 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 TTLL12Q14166 644 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-212ENST00000488774 SPRYD7Q5W111 196 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 ZGPATQ8N5A5 531 aaKnown RBP7.92□□□□□ -1.14
PTPRD-212ENST00000488774 SLC44A5Q8NCS7 719 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 WNK4Q96J92 1243 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 HHIPL1Q96JK4 782 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 MS4A4AQ96JQ5 239 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 ZNF112Q9UJU3 913 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms