RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 SREBF2Q12772 1141 aa15.61■□□□□ 0.09
PHF1-210ENST00000488767 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
PHF1-210ENST00000488767 WRNIP1Q96S55 665 aa15.61■□□□□ 0.09
PHF1-210ENST00000488767 WBP1LQ9NX94 342 aa15.61■□□□□ 0.09
PHF1-210ENST00000488767 FZD1Q9UP38 647 aa15.61■□□□□ 0.09
PHF1-210ENST00000488767 THSD7BQ9C0I4 1608 aa15.61■□□□□ 0.09
PHF1-210ENST00000488767 MX1P20591 662 aa15.6■□□□□ 0.09
PHF1-210ENST00000488767 CDAN1Q8IWY9 1227 aa15.6■□□□□ 0.09
PHF1-210ENST00000488767 TRIM34Q9BYJ4 488 aa15.6■□□□□ 0.09
PHF1-210ENST00000488767 RFX7Q2KHR2 1363 aa15.6■□□□□ 0.09
PHF1-210ENST00000488767 MAGEB6P1A0A0J9YX57 407 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 GLRX3O76003 335 aaKnown RBP15.59■□□□□ 0.09
PHF1-210ENST00000488767 PDE6AP16499 860 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 USP5P45974 858 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
PHF1-210ENST00000488767 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
PHF1-210ENST00000488767 MIGA2Q7L4E1 593 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 SMC5Q8IY18 1101 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 MIGA1Q8NAN2 632 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.59■□□□□ 0.09
PHF1-210ENST00000488767 OSBPL5Q9H0X9 879 aaPredicted RBP15.59■□□□□ 0.09
PHF1-210ENST00000488767 DHX36Q9H2U1 1008 aaKnown RBP15.59■□□□□ 0.09
PHF1-210ENST00000488767 PCNTO95613 3336 aa15.59■□□□□ 0.09
PHF1-210ENST00000488767 MANSC4A6NHS7 340 aaPredicted RBP15.58■□□□□ 0.08
PHF1-210ENST00000488767 HLA-DOAP06340 250 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 INHBEP58166 350 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 MKRN3Q13064 507 aaKnown RBP15.58■□□□□ 0.08
PHF1-210ENST00000488767 VGLL4Q14135 290 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 SPRYD7Q5W111 196 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 ADGRA1Q86SQ6 560 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 TGFBRAP1Q8WUH2 860 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 CLMNQ96JQ2 1002 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 CRNKL1Q9BZJ0 848 aaKnown RBP15.58■□□□□ 0.08
PHF1-210ENST00000488767 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 DDX4Q9NQI0 724 aaKnown RBP15.58■□□□□ 0.08
PHF1-210ENST00000488767 ZNF532Q9HCE3 1301 aa15.58■□□□□ 0.08
PHF1-210ENST00000488767 COL2A1P02458 1487 aaPredicted RBP15.58■□□□□ 0.08
PHF1-210ENST00000488767 OTUD7BQ6GQQ9 843 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 MAPKAPK5Q8IW41 473 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 ZFPM1Q8IX07 1006 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 OPTNQ96CV9 577 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 EDC3Q96F86 508 aaKnown RBP15.57■□□□□ 0.08
PHF1-210ENST00000488767 DDRGK1Q96HY6 314 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 WNK4Q96J92 1243 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 SAGE1Q9NXZ1 904 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 ATRNL1Q5VV63 1379 aa15.57■□□□□ 0.08
PHF1-210ENST00000488767 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
PHF1-210ENST00000488767 DYNLL1P63167 89 aaKnown RBP15.56■□□□□ 0.08
PHF1-210ENST00000488767 TSHZ3Q63HK5 1081 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 B4GALNT3Q6L9W6 998 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.56■□□□□ 0.08
PHF1-210ENST00000488767 ERO1BQ86YB8 467 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 CRACR2BQ8N4Y2 399 aaPredicted RBP15.56■□□□□ 0.08
PHF1-210ENST00000488767 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.56■□□□□ 0.08
PHF1-210ENST00000488767 PICK1Q9NRD5 415 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 FLT1P17948 1338 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 DOCK2Q92608 1830 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 AK9Q5TCS8 1911 aa15.56■□□□□ 0.08
PHF1-210ENST00000488767 DDTLA6NHG4 134 aaPredicted RBP15.55■□□□□ 0.08
PHF1-210ENST00000488767 FOXN1O15353 648 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 ALDH1A1P00352 501 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 ADD2P35612 726 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 UBE3CQ15386 1083 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 AMOTL1Q8IY63 956 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 KBTBD3Q8NAB2 608 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 ZKSCAN4Q969J2 545 aaPredicted RBP15.55■□□□□ 0.08
PHF1-210ENST00000488767 OTUD5Q96G74 571 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 LNPKQ9C0E8 428 aa15.55■□□□□ 0.08
PHF1-210ENST00000488767 HERC5Q9UII4 1024 aaKnown RBP15.55■□□□□ 0.08
PHF1-210ENST00000488767 SPDYE5A6NIY4 337 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 TBC1D12O60347 775 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 GTF2A2P52657 109 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 SH3BP5LQ7L8J4 393 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 TTC6Q86TZ1 520 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 CHD1LQ86WJ1 897 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 ZIC5Q96T25 663 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 FSD1Q9BTV5 496 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 ZNF112Q9UJU3 913 aa15.54■□□□□ 0.08
PHF1-210ENST00000488767 TCRBV5S4A2TA0A5A2 114 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 CTNND1O60716 968 aaKnown RBP15.53■□□□□ 0.08
PHF1-210ENST00000488767 IGHDP01880 384 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 INPP5BP32019 993 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 TM4SF4P48230 202 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 PPATQ06203 517 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 NOL9Q5SY16 702 aaKnown RBP15.53■□□□□ 0.08
PHF1-210ENST00000488767 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
PHF1-210ENST00000488767 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 RIOK1Q9BRS2 568 aaKnown RBP15.53■□□□□ 0.08
PHF1-210ENST00000488767 SAP30BPQ9UHR5 308 aaKnown RBP15.53■□□□□ 0.08
PHF1-210ENST00000488767 SNCAIPQ9Y6H5 919 aa15.53■□□□□ 0.08
PHF1-210ENST00000488767 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 TRPA1O75762 1119 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 MBD4O95243 580 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 NEFLP07196 543 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 PDE1AP54750 535 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 NUCB1Q02818 461 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 PPIL2Q13356 520 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 SNAPC2Q13487 334 aa15.52■□□□□ 0.08
PHF1-210ENST00000488767 TICAM2Q86XR7 235 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms