RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 INPP5BP32019 993 aa21.72■■□□□ 1.07
ITGB1-215ENST00000488494 ZSCAN29Q8IWY8 852 aaPredicted RBP21.72■■□□□ 1.07
ITGB1-215ENST00000488494 ZNF296Q8WUU4 475 aaPredicted RBP21.72■■□□□ 1.07
ITGB1-215ENST00000488494 CFHR5Q9BXR6 569 aa21.72■■□□□ 1.07
ITGB1-215ENST00000488494 R3HDMLQ9H3Y0 253 aa21.72■■□□□ 1.07
ITGB1-215ENST00000488494 PIH1D3Q9NQM4 214 aaKnown RBP21.72■■□□□ 1.07
ITGB1-215ENST00000488494 NAA16Q6N069 864 aaPredicted RBP21.71■■□□□ 1.07
ITGB1-215ENST00000488494 SH3BP5LQ7L8J4 393 aa21.71■■□□□ 1.07
ITGB1-215ENST00000488494 MS4A4AQ96JQ5 239 aa21.71■■□□□ 1.07
ITGB1-215ENST00000488494 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
ITGB1-215ENST00000488494 GPR25O00155 361 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 GTF2A2P52657 109 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 ERO1BQ86YB8 467 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 BRI3BPQ8WY22 251 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 KIF1BPQ96EK5 621 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 PTPN18Q99952 460 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 NDUFB9Q9Y6M9 179 aa21.7■■□□□ 1.06
ITGB1-215ENST00000488494 MYO5AQ9Y4I1 1855 aaKnown RBP21.7■■□□□ 1.06
ITGB1-215ENST00000488494 CCL15-CCL14A0A0B4J2E2 113 aa21.69■■□□□ 1.06
ITGB1-215ENST00000488494 TESPA1A2RU30 521 aaPredicted RBP21.69■■□□□ 1.06
ITGB1-215ENST00000488494 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
ITGB1-215ENST00000488494 CCL15Q16663 113 aa21.69■■□□□ 1.06
ITGB1-215ENST00000488494 NOM1Q5C9Z4 860 aaKnown RBP21.69■■□□□ 1.06
ITGB1-215ENST00000488494 ADGRA1Q86SQ6 560 aa21.69■■□□□ 1.06
ITGB1-215ENST00000488494 NOL10Q9BSC4 688 aaKnown RBP21.69■■□□□ 1.06
ITGB1-215ENST00000488494 BCL11AQ9H165 835 aa21.69■■□□□ 1.06
ITGB1-215ENST00000488494 ZNF112Q9UJU3 913 aa21.69■■□□□ 1.06
ITGB1-215ENST00000488494 PPIL2Q13356 520 aa21.68■■□□□ 1.06
ITGB1-215ENST00000488494 OTUD7BQ6GQQ9 843 aa21.68■■□□□ 1.06
ITGB1-215ENST00000488494 CTU1Q7Z7A3 348 aaKnown RBP21.68■■□□□ 1.06
ITGB1-215ENST00000488494 TEX11Q8IYF3 940 aa21.68■■□□□ 1.06
ITGB1-215ENST00000488494 CLASRPQ8N2M8 674 aaKnown RBP21.68■■□□□ 1.06
ITGB1-215ENST00000488494 SH3RF3Q8TEJ3 882 aaPredicted RBP21.68■■□□□ 1.06
ITGB1-215ENST00000488494 AATFQ9NY61 560 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■□□□□ 10.9
ITGB1-215ENST00000488494 COL2A1P02458 1487 aaPredicted RBP21.68■■□□□ 1.06
ITGB1-215ENST00000488494 IDH1O75874 414 aaKnown RBP21.67■■□□□ 1.06
ITGB1-215ENST00000488494 MAP4K4O95819 1239 aaPredicted RBP21.67■■□□□ 1.06
ITGB1-215ENST00000488494 CRHR2Q13324 411 aa21.67■■□□□ 1.06
ITGB1-215ENST00000488494 NOL9Q5SY16 702 aaKnown RBP21.67■■□□□ 1.06
ITGB1-215ENST00000488494 IRF6O14896 467 aa21.66■■□□□ 1.06
ITGB1-215ENST00000488494 RAB11FIP3O75154 756 aa21.66■■□□□ 1.06
ITGB1-215ENST00000488494 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
ITGB1-215ENST00000488494 SLURP2P0DP57 97 aa21.66■■□□□ 1.06
ITGB1-215ENST00000488494 SNAPC2Q13487 334 aa21.66■■□□□ 1.06
ITGB1-215ENST00000488494 DOCK1Q14185 1865 aa21.66■■□□□ 1.06
ITGB1-215ENST00000488494 PHF20L1A8MW92 1017 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 FKTNO75072 461 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 BAG3O95817 575 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 IFIT2P09913 472 aaKnown RBP21.65■■□□□ 1.06
ITGB1-215ENST00000488494 CETPP11597 493 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 PPATQ06203 517 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 FAM43AQ8N2R8 423 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 OSBPL5Q9H0X9 879 aaPredicted RBP21.65■■□□□ 1.06
ITGB1-215ENST00000488494 ANTXR1Q9H6X2 564 aa21.65■■□□□ 1.06
ITGB1-215ENST00000488494 CDK5RAP2Q96SN8 1893 aa21.64■■□□□ 1.06
ITGB1-215ENST00000488494 FOCADQ5VW36 1801 aa21.64■■□□□ 1.06
ITGB1-215ENST00000488494 CCDC85CA6NKD9 419 aa21.64■■□□□ 1.05
ITGB1-215ENST00000488494 PLCG2P16885 1265 aa21.64■■□□□ 1.05
ITGB1-215ENST00000488494 FAM196BA6NMK8 535 aa21.63■■□□□ 1.05
ITGB1-215ENST00000488494 IGSF3O75054 1194 aa21.63■■□□□ 1.05
ITGB1-215ENST00000488494 CYP7A1P22680 504 aa21.63■■□□□ 1.05
ITGB1-215ENST00000488494 RRP1P56182 461 aaKnown RBP21.63■■□□□ 1.05
ITGB1-215ENST00000488494 SCYL3Q8IZE3 742 aa21.63■■□□□ 1.05
ITGB1-215ENST00000488494 SIPA1L1O43166 1804 aa21.62■■□□□ 1.05
ITGB1-215ENST00000488494 FLT1P17948 1338 aa21.62■■□□□ 1.05
ITGB1-215ENST00000488494 TAF1CQ15572 869 aaPredicted RBP21.62■■□□□ 1.05
ITGB1-215ENST00000488494 MAGEB6Q8N7X4 407 aa21.62■■□□□ 1.05
ITGB1-215ENST00000488494 PICK1Q9NRD5 415 aa21.62■■□□□ 1.05
ITGB1-215ENST00000488494 HTTP42858 3142 aa21.62■■□□□ 1.05
ITGB1-215ENST00000488494 PPP4CP60510 307 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 MAP3K10Q02779 954 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 MAP3K12Q12852 859 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 MAPKAPK5Q8IW41 473 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 MIGA1Q8NAN2 632 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 TGFBRAP1Q8WUH2 860 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 DNAJC2Q99543 621 aaKnown RBP21.61■■□□□ 1.05
ITGB1-215ENST00000488494 KCNH4Q9UQ05 1017 aa21.61■■□□□ 1.05
ITGB1-215ENST00000488494 BTBD19C9JJ37 291 aa21.6■■□□□ 1.05
ITGB1-215ENST00000488494 DYNLL1P63167 89 aaKnown RBP21.6■■□□□ 1.05
ITGB1-215ENST00000488494 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
ITGB1-215ENST00000488494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.6■■□□□ 1.05
ITGB1-215ENST00000488494 TBC1D12O60347 775 aa21.59■■□□□ 1.05
ITGB1-215ENST00000488494 PTPRAP18433 802 aa21.59■■□□□ 1.05
ITGB1-215ENST00000488494 TTF1Q15361 905 aaPredicted RBP21.59■■□□□ 1.05
ITGB1-215ENST00000488494 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.59■■□□□ 1.05
ITGB1-215ENST00000488494 ZFYVE28Q9HCC9 887 aa21.59■■□□□ 1.05
ITGB1-215ENST00000488494 ZCCHC17Q9NP64 241 aaKnown RBP21.59■■□□□ 1.05
ITGB1-215ENST00000488494 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.59■■□□□ 1.05
ITGB1-215ENST00000488494 GOLIM4O00461 696 aa21.58■■□□□ 1.05
ITGB1-215ENST00000488494 SMARCA5O60264 1052 aaPredicted RBP21.58■■□□□ 1.05
ITGB1-215ENST00000488494 CTNND1O60716 968 aaKnown RBP21.58■■□□□ 1.05
ITGB1-215ENST00000488494 PKN2Q16513 984 aaKnown RBP21.58■■□□□ 1.05
ITGB1-215ENST00000488494 PHIPQ8WWQ0 1821 aa21.57■■□□□ 1.04
ITGB1-215ENST00000488494 ATAD5Q96QE3 1844 aa21.57■■□□□ 1.04
ITGB1-215ENST00000488494 CD99L2Q8TCZ2 262 aa21.57■■□□□ 1.04
ITGB1-215ENST00000488494 EDC3Q96F86 508 aaKnown RBP21.57■■□□□ 1.04
ITGB1-215ENST00000488494 ERO1AQ96HE7 468 aa21.57■■□□□ 1.04
ITGB1-215ENST00000488494 DHX36Q9H2U1 1008 aaKnown RBP21.57■■□□□ 1.04
ITGB1-215ENST00000488494 SAP30BPQ9UHR5 308 aaKnown RBP21.57■■□□□ 1.04
ITGB1-215ENST00000488494 ZHX2Q9Y6X8 837 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms