RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 LMBRD1Q9NUN5 540 aa23.76■■□□□ 1.39
NECAB3-213ENST00000488489 TCHHQ07283 1943 aa23.76■■□□□ 1.39
NECAB3-213ENST00000488489 VPS37CA5D8V6 355 aaPredicted RBP23.75■■□□□ 1.39
NECAB3-213ENST00000488489 SH3RF3Q8TEJ3 882 aaPredicted RBP23.75■■□□□ 1.39
NECAB3-213ENST00000488489 TBC1D22AQ8WUA7 517 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 C7orf43Q8WVR3 580 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 CNKSR1Q969H4 720 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 RTFDC1Q9BY42 306 aaPredicted RBP23.75■■□□□ 1.39
NECAB3-213ENST00000488489 GRPEL1Q9HAV7 217 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 LY9Q9HBG7 655 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 MROH7-TTC4A0A0A0MT08 1334 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 GOLGA8BA8MQT2 603 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 PPFIA3O75145 1194 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 PPP4CP60510 307 aa23.75■■□□□ 1.39
NECAB3-213ENST00000488489 RNF41Q9H4P4 317 aaPredicted RBP23.75■■□□□ 1.39
NECAB3-213ENST00000488489 MKRN1Q9UHC7 482 aaKnown RBP23.75■■□□□ 1.39
NECAB3-213ENST00000488489 PDCP20941 246 aa23.74■■□□□ 1.39
NECAB3-213ENST00000488489 CDC37L1Q7L3B6 337 aa23.74■■□□□ 1.39
NECAB3-213ENST00000488489 PTPDC1A2A3K4 754 aa23.74■■□□□ 1.39
NECAB3-213ENST00000488489 PRPF40AO75400 957 aaKnown RBP23.74■■□□□ 1.39
NECAB3-213ENST00000488489 ZKSCAN3Q9BRR0 538 aa23.74■■□□□ 1.39
NECAB3-213ENST00000488489 LDHCP07864 332 aa23.73■■□□□ 1.39
NECAB3-213ENST00000488489 TMEM67Q5HYA8 995 aa23.73■■□□□ 1.39
NECAB3-213ENST00000488489 CERS5Q8N5B7 392 aa23.73■■□□□ 1.39
NECAB3-213ENST00000488489 C10orf71Q711Q0 1435 aa23.73■■□□□ 1.39
NECAB3-213ENST00000488489 IFIT3O14879 490 aaKnown RBP23.72■■□□□ 1.39
NECAB3-213ENST00000488489 FGRP09769 529 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 CYP2D6P10635 497 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 SGMS1Q86VZ5 419 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 SLC16A10Q8TF71 515 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 BAG3O95817 575 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 LIFRP42702 1097 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 APOA5Q6Q788 366 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 MXD3Q9BW11 206 aa23.72■■□□□ 1.39
NECAB3-213ENST00000488489 GPR75-ASB3A0A0A6YYF3 556 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 PRDM1O75626 825 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 USP17L8P0C7I0 530 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 BTDP43251 543 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 FBXW7Q969H0 707 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 FAM163AQ96GL9 167 aaPredicted RBP23.71■■□□□ 1.39
NECAB3-213ENST00000488489 EYA3Q99504 573 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 SNED1Q8TER0 1413 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 FDPSP14324 419 aaKnown RBP23.71■■□□□ 1.39
NECAB3-213ENST00000488489 RXRAP19793 462 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 SBK1Q52WX2 424 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 DBNDD1Q9H9R9 158 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 KCNQ5Q9NR82 932 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 MCM9Q9NXL9 1143 aa23.71■■□□□ 1.39
NECAB3-213ENST00000488489 PDIA4P13667 645 aaKnown RBP23.7■■□□□ 1.38
NECAB3-213ENST00000488489 HMGN5P82970 282 aaKnown RBP23.7■■□□□ 1.38
NECAB3-213ENST00000488489 CCDC125Q86Z20 511 aa23.7■■□□□ 1.38
NECAB3-213ENST00000488489 GDPD2Q9HCC8 539 aa23.7■■□□□ 1.38
NECAB3-213ENST00000488489 ARPP21Q9UBL0 812 aaPredicted RBP23.7■■□□□ 1.38
NECAB3-213ENST00000488489 USP5P45974 858 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 SLC4A8Q2Y0W8 1093 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 FERMT3Q86UX7 667 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 FAM184AQ8NB25 1140 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 TGFBRAP1Q8WUH2 860 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 ESR2Q92731 530 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 GAKO14976 1311 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 NOL10Q9BSC4 688 aaKnown RBP23.69■■□□□ 1.38
NECAB3-213ENST00000488489 MYL10Q9BUA6 226 aa23.69■■□□□ 1.38
NECAB3-213ENST00000488489 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.69■■□□□ 1.382e-6■■□□□ 12.1
NECAB3-213ENST00000488489 LAMB1P07942 1786 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 ADD1P35611 737 aaKnown RBP23.68■■□□□ 1.38
NECAB3-213ENST00000488489 NFXL1Q6ZNB6 911 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 CDK5RAP2Q96SN8 1893 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 G3V3G9 751 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 RHBDL3P58872 404 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 DCAF8Q5TAQ9 597 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 PODNQ7Z5L7 613 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 MICU3Q86XE3 530 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 CHMP4CQ96CF2 233 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 CNPY2Q9Y2B0 182 aa23.68■■□□□ 1.38
NECAB3-213ENST00000488489 DDX49Q9Y6V7 483 aaKnown RBP23.68■■□□□ 1.38
NECAB3-213ENST00000488489 F8W031 263 aaPredicted RBP23.67■■□□□ 1.38
NECAB3-213ENST00000488489 C21orf2O43822 256 aa23.67■■□□□ 1.38
NECAB3-213ENST00000488489 DHX16O60231 1041 aaKnown RBP23.67■■□□□ 1.38
NECAB3-213ENST00000488489 KCNA3P22001 575 aa23.67■■□□□ 1.38
NECAB3-213ENST00000488489 CDC27P30260 824 aa23.67■■□□□ 1.38
NECAB3-213ENST00000488489 METAP2P50579 478 aaKnown RBP eCLIP23.67■■□□□ 1.38
NECAB3-213ENST00000488489 MTA3Q9BTC8 594 aa23.67■■□□□ 1.38
NECAB3-213ENST00000488489 ZBTB43O43298 467 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 RANBP6O60518 1105 aaKnown RBP23.66■■□□□ 1.38
NECAB3-213ENST00000488489 PCP11498 1178 aaKnown RBP23.66■■□□□ 1.38
NECAB3-213ENST00000488489 DNM1Q05193 864 aaKnown RBP23.66■■□□□ 1.38
NECAB3-213ENST00000488489 WTAPQ15007 396 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 SART3Q15020 963 aaKnown RBP23.66■■□□□ 1.38
NECAB3-213ENST00000488489 KLHL40Q2TBA0 621 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 CCDC144CPQ8IYA2 1237 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 FAM217BQ9NTX9 383 aaPredicted RBP23.66■■□□□ 1.38
NECAB3-213ENST00000488489 SUGT1Q9Y2Z0 365 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 DAGLAQ9Y4D2 1042 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 ATP6V1DQ9Y5K8 247 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 SLC12A7Q9Y666 1083 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 SCN9AQ15858 1988 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 ZBTB7AO95365 584 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 CLCN1P35523 988 aa23.66■■□□□ 1.38
NECAB3-213ENST00000488489 SEC23AQ15436 765 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms