RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 FLT3LGP49771 235 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 NFIAQ12857 509 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 ZFPM1Q8IX07 1006 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
LCN2-206ENST00000488391 VGLL2Q8N8G2 317 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 PPP4R2Q9NY27 417 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 MGAMO43451 1857 aa13.61□□□□□ -0.23
LCN2-206ENST00000488391 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
LCN2-206ENST00000488391 INHAP05111 366 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 IFIT1P09914 478 aaKnown RBP13.6□□□□□ -0.23
LCN2-206ENST00000488391 DIXDC1Q155Q3 683 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
LCN2-206ENST00000488391 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 DEFB118Q96PH6 123 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 USP40Q9NVE5 1235 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
LCN2-206ENST00000488391 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 COL6A3P12111 3177 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 A0A1W2PPC1 479 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 AAMPQ13685 434 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 RABL6Q3YEC7 729 aaPredicted RBP13.59□□□□□ -0.23
LCN2-206ENST00000488391 ATF7IPQ6VMQ6 1270 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
LCN2-206ENST00000488391 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
LCN2-206ENST00000488391 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
LCN2-206ENST00000488391 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
LCN2-206ENST00000488391 FGFR2P21802 821 aa13.58□□□□□ -0.24
LCN2-206ENST00000488391 PUM3Q15397 648 aaKnown RBP13.58□□□□□ -0.24
LCN2-206ENST00000488391 FASTKD5Q7L8L6 764 aaKnown RBP13.58□□□□□ -0.24
LCN2-206ENST00000488391 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.24
LCN2-206ENST00000488391 UTYO14607 1347 aa13.58□□□□□ -0.24
LCN2-206ENST00000488391 A0A0G2JLL6 359 aaPredicted RBP13.57□□□□□ -0.24
LCN2-206ENST00000488391 PHF20L1A8MW92 1017 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PTPRAP18433 802 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PRDX5P30044 214 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 C20orf194Q5TEA3 1177 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PRRT2Q7Z6L0 340 aaPredicted RBP13.57□□□□□ -0.24
LCN2-206ENST00000488391 SCYL3Q8IZE3 742 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PXYLP1Q8TE99 480 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 DIS3LQ8TF46 1054 aaKnown RBP13.57□□□□□ -0.24
LCN2-206ENST00000488391 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PICK1Q9NRD5 415 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 NOB1Q9ULX3 412 aaKnown RBP13.57□□□□□ -0.24
LCN2-206ENST00000488391 AFG3L2Q9Y4W6 797 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 PTPRCP08575 1304 aa13.57□□□□□ -0.24
LCN2-206ENST00000488391 LDHBP07195 334 aaKnown RBP13.56□□□□□ -0.24
LCN2-206ENST00000488391 SLURP2P0DP57 97 aa13.56□□□□□ -0.24
LCN2-206ENST00000488391 SLC5A1P13866 664 aa13.56□□□□□ -0.24
LCN2-206ENST00000488391 TRIM27P14373 513 aa13.56□□□□□ -0.24
LCN2-206ENST00000488391 IRF5Q13568 498 aa13.56□□□□□ -0.24
LCN2-206ENST00000488391 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
LCN2-206ENST00000488391 API5Q9BZZ5 524 aaKnown RBP13.56□□□□□ -0.24
LCN2-206ENST00000488391 PAK6Q9NQU5 681 aaPredicted RBP13.56□□□□□ -0.24
LCN2-206ENST00000488391 ZMYND8Q9ULU4 1186 aaPredicted RBP13.56□□□□□ -0.24
LCN2-206ENST00000488391 RGS3P49796 1198 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 Q7L0L9 218 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 NECAB2Q7Z6G3 386 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 ZSCAN29Q8IWY8 852 aaPredicted RBP13.55□□□□□ -0.24
LCN2-206ENST00000488391 FTSJ3Q8IY81 847 aaKnown RBP13.55□□□□□ -0.24
LCN2-206ENST00000488391 C7orf61Q8IZ16 206 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 ANKRD13CQ8N6S4 541 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 COA7Q96BR5 231 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 GDF15Q99988 308 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
LCN2-206ENST00000488391 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
LCN2-206ENST00000488391 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 TRIM75PA6NK02 468 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 EYA2O00167 538 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 CAPN2P17655 700 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 SH3BP5LQ7L8J4 393 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 CCDC84Q86UT8 332 aaPredicted RBP13.54□□□□□ -0.24
LCN2-206ENST00000488391 LPIN2Q92539 896 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.54□□□□□ -0.24
LCN2-206ENST00000488391 SLC45A1Q9Y2W3 748 aa13.54□□□□□ -0.24
LCN2-206ENST00000488391 MYH13Q9UKX3 1938 aa13.53□□□□□ -0.24
LCN2-206ENST00000488391 SYN1P17600 705 aa13.53□□□□□ -0.24
LCN2-206ENST00000488391 BMP8BP34820 402 aa13.53□□□□□ -0.24
LCN2-206ENST00000488391 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
LCN2-206ENST00000488391 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
LCN2-206ENST00000488391 PANK1Q8TE04 598 aa13.53□□□□□ -0.24
LCN2-206ENST00000488391 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
LCN2-206ENST00000488391 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
LCN2-206ENST00000488391 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.25
LCN2-206ENST00000488391 ENTPD3O75355 529 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 RLBP1P12271 317 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 RFX5P48382 616 aaPredicted RBP13.52□□□□□ -0.25
LCN2-206ENST00000488391 TREML2Q5T2D2 321 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 ATG9AQ7Z3C6 839 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 CHMP4BQ9H444 224 aaKnown RBP13.52□□□□□ -0.25
LCN2-206ENST00000488391 GNL3LQ9NVN8 582 aaKnown RBP13.52□□□□□ -0.25
LCN2-206ENST00000488391 DDX19BQ9UMR2 479 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 AGTPBP1Q9UPW5 1226 aa13.52□□□□□ -0.25
LCN2-206ENST00000488391 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms