RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 TTC41PQ6P2S7 1318 aa19.44■□□□□ 0.7
ERGIC3-216ENST00000488384 COL2A1P02458 1487 aaPredicted RBP19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 BAG3O95817 575 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 IREB2P48200 963 aaKnown RBP19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 MAP2K1Q02750 393 aaPredicted RBP19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 NOGQ13253 232 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 SH3BP5LQ7L8J4 393 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 TEX11Q8IYF3 940 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 AIDAQ96BJ3 306 aa19.43■□□□□ 0.7
ERGIC3-216ENST00000488384 TCRBV5S4A2TA0A5A2 114 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 PLCG2P16885 1265 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 MX1P20591 662 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 MAP2K2P36507 400 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 DYNLL1P63167 89 aaKnown RBP19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 SLC9C2Q5TAH2 1124 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 PI4K2BQ8TCG2 481 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 CLMNQ96JQ2 1002 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 AK9Q5TCS8 1911 aa19.42■□□□□ 0.7
ERGIC3-216ENST00000488384 CAPN15O75808 1086 aa19.41■□□□□ 0.7
ERGIC3-216ENST00000488384 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.41■□□□□ 0.76e-12■□□□□ 9.9
ERGIC3-216ENST00000488384 HOOK2Q96ED9 719 aa19.41■□□□□ 0.7
ERGIC3-216ENST00000488384 OSBPL5Q9H0X9 879 aaPredicted RBP19.41■□□□□ 0.7
ERGIC3-216ENST00000488384 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
ERGIC3-216ENST00000488384 ZNF532Q9HCE3 1301 aa19.41■□□□□ 0.7
ERGIC3-216ENST00000488384 DDTLA6NHG4 134 aaPredicted RBP19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 UNCXA6NJT0 531 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 ADD2P35612 726 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 DCAF15Q66K64 600 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 B4GALNT3Q6L9W6 998 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 ANKRD13AQ8IZ07 590 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 CSRNP1Q96S65 589 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 RIOK1Q9BRS2 568 aaKnown RBP19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 LNPKQ9C0E8 428 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 CASP8AP2Q9UKL3 1982 aa19.4■□□□□ 0.7
ERGIC3-216ENST00000488384 DDX60LQ5H9U9 1706 aaKnown RBP19.39■□□□□ 0.7
ERGIC3-216ENST00000488384 LAMB1P07942 1786 aa19.39■□□□□ 0.7
ERGIC3-216ENST00000488384 SIPA1L1O43166 1804 aa19.39■□□□□ 0.7
ERGIC3-216ENST00000488384 GLRX3O76003 335 aaKnown RBP19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 CHGBP05060 677 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 NUCB1Q02818 461 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 SLFNL1Q499Z3 407 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 MIGA2Q7L4E1 593 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 CERS3Q8IU89 383 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 ZSCAN29Q8IWY8 852 aaPredicted RBP19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 TSKSQ9UJT2 592 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 FLT1P17948 1338 aa19.39■□□□□ 0.69
ERGIC3-216ENST00000488384 ERC2O15083 957 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 KIF23Q02241 960 aaPredicted RBP19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 VGLL4Q14135 290 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 KBTBD3Q8NAB2 608 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 TGFBRAP1Q8WUH2 860 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 WRNIP1Q96S55 665 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 ZNF341Q9BYN7 854 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 STAP2Q9UGK3 403 aa19.38■□□□□ 0.69
ERGIC3-216ENST00000488384 MAGEB6P1A0A0J9YX57 407 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 SLURP2P0DP57 97 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 MAP3K9P80192 1104 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 SPRYD7Q5W111 196 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 CHD1LQ86WJ1 897 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 MAPKAPK5Q8IW41 473 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 WNK4Q96J92 1243 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 ELP3Q9H9T3 547 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 NAV1Q8NEY1 1877 aa19.37■□□□□ 0.69
ERGIC3-216ENST00000488384 GJA5P36382 358 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 PDE1AP54750 535 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 MKRN3Q13064 507 aaKnown RBP19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 UBE3CQ15386 1083 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 SLC10A4Q96EP9 437 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
ERGIC3-216ENST00000488384 INPP5BP32019 993 aa19.35■□□□□ 0.69
ERGIC3-216ENST00000488384 MAP3K10Q02779 954 aa19.35■□□□□ 0.69
ERGIC3-216ENST00000488384 LCORLQ8N3X6 602 aa19.35■□□□□ 0.69
ERGIC3-216ENST00000488384 ZKSCAN4Q969J2 545 aaPredicted RBP19.35■□□□□ 0.69
ERGIC3-216ENST00000488384 CSADQ9Y600 493 aa19.35■□□□□ 0.69
ERGIC3-216ENST00000488384 MYH1P12882 1939 aa19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 MBD4O95243 580 aa19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 ZBTB48P10074 688 aaPredicted RBP19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 ZSCAN25Q6NSZ9 544 aa19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 CNKSR2Q8WXI2 1034 aa19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 ARMT1Q9H993 441 aa19.34■□□□□ 0.69
ERGIC3-216ENST00000488384 DOCK1Q14185 1865 aa19.33■□□□□ 0.69
ERGIC3-216ENST00000488384 FAM196BA6NMK8 535 aa19.33■□□□□ 0.68
ERGIC3-216ENST00000488384 PHF20L1A8MW92 1017 aa19.33■□□□□ 0.68
ERGIC3-216ENST00000488384 USP5P45974 858 aa19.33■□□□□ 0.68
ERGIC3-216ENST00000488384 OPTNQ96CV9 577 aa19.33■□□□□ 0.68
ERGIC3-216ENST00000488384 SAP30BPQ9UHR5 308 aaKnown RBP19.33■□□□□ 0.68
ERGIC3-216ENST00000488384 SPDYE5A6NIY4 337 aa19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 TBC1D12O60347 775 aa19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 NOL9Q5SY16 702 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 CRNKL1Q9BZJ0 848 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 PUS7LQ9H0K6 701 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 DHX36Q9H2U1 1008 aaKnown RBP19.32■□□□□ 0.68
ERGIC3-216ENST00000488384 PALD1Q9ULE6 856 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms