RNA–Protein interactions for RNA: ENST00000488180.1

SP100-216, Transcript of SP100 nuclear antigen, human

TSL 2

Gene SP100, Length 3,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SP100-216	ENST00000488180	FOXR1	Q6PIV2	292 aa		4.28	□□□□□ -1.72
SP100-216	ENST00000488180	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.28	□□□□□ -1.72
SP100-216	ENST00000488180	SUGP1	Q8IWZ8	645 aa	Known RBP	4.28	□□□□□ -1.72
SP100-216	ENST00000488180	MICALL1	Q8N3F8	863 aa		4.28	□□□□□ -1.72
SP100-216	ENST00000488180	BICD2	Q8TD16	824 aa		4.28	□□□□□ -1.72
SP100-216	ENST00000488180	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.28	□□□□□ -1.72
SP100-216	ENST00000488180	PPP1R13B	Q96KQ4	1090 aa		4.28	□□□□□ -1.72
SP100-216	ENST00000488180	TFIP11	Q9UBB9	837 aa	Known RBP	4.28	□□□□□ -1.72
SP100-216	ENST00000488180	EFCAB8	A8MWE9	144 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CAVIN2	O95810	425 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	TUBB4A	P04350	444 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CHML	P26374	656 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CORO7	P57737	925 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	GSDMD	P57764	484 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	MAP3K10	Q02779	954 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	MMRN1	Q13201	1228 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	TWISTNB	Q3B726	338 aa	Predicted RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	LARP1B	Q659C4	914 aa	Known RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CEP85	Q6P2H3	762 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CCDC83	Q8IWF9	413 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	DCBLD2	Q96PD2	775 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CEP89	Q96ST8	783 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	THUMPD2	Q9BTF0	503 aa	Known RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	MED4	Q9NPJ6	270 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	SSUH2	Q9Y2M2	353 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	GOLIM4	O00461	696 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	KIF3C	O14782	793 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	NPR1	P16066	1061 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	YBX3	P16989	372 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	PDE6B	P35913	854 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	ETF1	P62495	437 aa	Known RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	MCM6	Q14566	821 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	SARM1	Q6SZW1	724 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	EGFL6	Q8IUX8	553 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	SPATA32	Q96LK8	384 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	SRRT	Q9BXP5	876 aa	Known RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	CLSTN2	Q9H4D0	955 aa		4.27	□□□□□ -1.73
SP100-216	ENST00000488180	MKRN1	Q9UHC7	482 aa	Known RBP	4.27	□□□□□ -1.73
SP100-216	ENST00000488180	PSD	A5PKW4	1024 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	HMMR	O75330	724 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	NR1I2	O75469	434 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	TADA3	O75528	432 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	HSP90B1	P14625	803 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	RPS12	P25398	132 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	HSPA4	P34932	840 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	RUFY3	Q7L099	469 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	EFCAB13	Q8IY85	973 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	FAM177A1	Q8N128	213 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	GPR161	Q8N6U8	529 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PLBD2	Q8NHP8	589 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	ZC3H15	Q8WU90	426 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	FUT8	Q9BYC5	575 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	OSBPL3	Q9H4L5	887 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	KCND1	Q9NSA2	647 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	NLRP2	Q9NX02	1062 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	ASAP1	Q9ULH1	1129 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	UBN2	Q6ZU65	1347 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	CCDC196	A0A1B0GTZ2	297 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180		H3BQF6	201 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	CPA1	P15085	419 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	SFPQ	P23246	707 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	POLD1	P28340	1107 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	NT5C2	P49902	561 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	FKBP4	Q02790	459 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	IQCB1	Q15051	598 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	LRRFIP1	Q32MZ4	808 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	C1orf141	Q5JVX7	400 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	CWC27	Q6UX04	472 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	CEP120	Q8N960	986 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	FBXW7	Q969H0	707 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PHACTR3	Q96KR7	559 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	HYPK	Q9NX55	129 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	SUGT1	Q9Y2Z0	365 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	RTCB	Q9Y3I0	505 aa	Known RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	ATRNL1	Q5VV63	1379 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180		A0A087WUV0	522 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	POTEC	B2RU33	542 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	STARD3NL	O95772	234 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	IGHA2	P01877	340 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PRELP	P51888	382 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	GNAI1	P63096	354 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	LONRF2	Q1L5Z9	754 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	LRCH2	Q5VUJ6	765 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	SULT6B1	Q6IMI4	303 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.26	□□□□□ -1.73
SP100-216	ENST00000488180	TADA2B	Q86TJ2	420 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	RPAIN	Q86UA6	219 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PARD6B	Q9BYG5	372 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PLEKHA4	Q9H4M7	779 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PDE11A	Q9HCR9	933 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	STRN4	Q9NRL3	753 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	PPP2R3B	Q9Y5P8	575 aa		4.26	□□□□□ -1.73
SP100-216	ENST00000488180	ZNF804B	A4D1E1	1349 aa		4.25	□□□□□ -1.73
SP100-216	ENST00000488180	TESPA1	A2RU30	521 aa	Predicted RBP	4.25	□□□□□ -1.73
SP100-216	ENST00000488180		H7C1W4	665 aa		4.25	□□□□□ -1.73
SP100-216	ENST00000488180	SRGAP3	O43295	1099 aa		4.25	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms