RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PTPN11Q06124 597 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 SOX4Q06945 474 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 KIF4BQ2VIQ3 1234 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 BNC2Q6ZN30 1099 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 DYMQ7RTS9 669 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 GAL3ST3Q96A11 431 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 ELMO3Q96BJ8 720 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 SPON2Q9BUD6 331 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 PICK1Q9NRD5 415 aa6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 DDX41Q9UJV9 622 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 SUPT16HQ9Y5B9 1047 aaKnown RBP6.27□□□□□ -1.41
ECHDC1-217ENST00000488087 DCDC2CA8MYV0 355 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 RACK1P63244 317 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 CCDC84Q86UT8 332 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 KIAA0825Q8IV33 1275 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 ZNF296Q8WUU4 475 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 MEGF10Q96KG7 1140 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 KRTAP4-12Q9BQ66 201 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 TGIF2Q9GZN2 237 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 IGSF5Q9NSI5 407 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 CACNA2D2Q9NY47 1150 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 ADAMTS1Q9UHI8 967 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 PPP1R9AQ9ULJ8 1098 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 CSADQ9Y600 493 aa6.26□□□□□ -1.41
ECHDC1-217ENST00000488087 TMPRSS2O15393 492 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 TIAF1O95411 115 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 F13A1P00488 732 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 USP11P51784 963 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 WIPI1Q5MNZ9 446 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 Q6ZS46 218 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 HDXQ7Z353 690 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 GATAD2BQ8WXI9 593 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 UTP4Q969X6 686 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 PLPPR2Q96GM1 343 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 SYNGAP1Q96PV0 1343 aa6.25□□□□□ -1.41
ECHDC1-217ENST00000488087 PRAMEF27A3QJZ7 478 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 BTBD11A6QL63 1104 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 TLR3O15455 904 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 ASPAP45381 313 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 RAD51AP2Q09MP3 1159 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 INPP5AQ14642 412 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 ZC3H12AQ5D1E8 599 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 LRFN4Q6PJG9 635 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 C12orf40Q86WS4 652 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 DZIP1LQ8IYY4 767 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 C2CD4AQ8NCU7 369 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 ATXN3LQ9H3M9 355 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 ACBD3Q9H3P7 528 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 CRIM1Q9NZV1 1036 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 PCDHGC5Q9Y5F6 944 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 ACTL7BQ9Y614 415 aa6.24□□□□□ -1.41
ECHDC1-217ENST00000488087 RNGTTO60942 597 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 CILPO75339 1184 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 RAB6AP20340 208 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 GARTP22102 1010 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 RXRBP28702 533 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 CDK8P49336 464 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 RPL6Q02878 288 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 APOBRQ0VD83 1088 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 UVSSAQ2YD98 709 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 PPM1JQ5JR12 505 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 TP53INP1Q96A56 240 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 FAM46AQ96IP4 442 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 KCNF1Q9H3M0 494 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 UBP1Q9NZI7 540 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 INPP5FQ9Y2H2 1132 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 HIF3AQ9Y2N7 669 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 SNCAIPQ9Y6H5 919 aa6.23□□□□□ -1.41
ECHDC1-217ENST00000488087 FAM221AA4D161 298 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 GREM1O60565 184 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 BMP3P12645 472 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 HCLS1P14317 486 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 ERVK-24P63145 666 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 PAK2Q13177 524 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 MPP2Q14168 576 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 TTLL4Q14679 1199 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 CWF19L2Q2TBE0 894 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 EAF1Q96JC9 268 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 MYRFLQ96LU7 910 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 YIPF2Q9BWQ6 316 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 CAPN10Q9HC96 672 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 SSU72Q9NP77 194 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 KCNQ5Q9NR82 932 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 DISC1Q9NRI5 854 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 FAM105AQ9NUU6 356 aa6.22□□□□□ -1.41
ECHDC1-217ENST00000488087 ROBO2Q9HCK4 1378 aa6.21□□□□□ -1.41
ECHDC1-217ENST00000488087 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 DHX15O43143 795 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 CRKP46108 304 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 TNNI2P48788 182 aa6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-217ENST00000488087 GNL2Q13823 731 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms