RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 SUCLG2Q96I99 432 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 CRAMP1Q96RY5 1269 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 KCTD15Q96SI1 283 aaPredicted RBP9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 TAOK3Q9H2K8 898 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
NECTIN3-209ENST00000488016 MYH3P11055 1940 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 BMP2P12643 396 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 TTLL11Q8NHH1 800 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 ADAM32Q8TC27 787 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 KAZALD1Q96I82 304 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 LRRC37AA6NMS7 1700 aa9.84□□□□□ -0.83
NECTIN3-209ENST00000488016 PTPRCP08575 1304 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 GRM8O00222 908 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 CT47B1P0C2W7 299 aaPredicted RBP9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 LMNB1P20700 586 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 FOXO4P98177 505 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 FKBP4Q02790 459 aaKnown RBP eCLIP9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 DHX9Q08211 1270 aaKnown RBP9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 CCDC152Q4G0S7 254 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 MEIOBQ8N635 442 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 NXF1Q9UBU9 619 aaKnown RBP9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 ATP6V0A2Q9Y487 856 aa9.83□□□□□ -0.84
NECTIN3-209ENST00000488016 ZNF541Q9H0D2 1346 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 ALDH1L1O75891 902 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 TRIM27P14373 513 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 GPSM2P81274 684 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 NBPF20Q3BBV1 942 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 PPP1R26Q5T8A7 1209 aaPredicted RBP9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 C9orf78Q9NZ63 289 aaPredicted RBP9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 LTBP1Q14766 1721 aa9.82□□□□□ -0.84
NECTIN3-209ENST00000488016 SNAP23O00161 211 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 RLBP1P12271 317 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 ITGA6P23229 1130 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 IARSP41252 1262 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 RPS8P62241 208 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 AOC3Q16853 763 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 LMBR1LQ6UX01 489 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 SP8Q8IXZ3 490 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 MEIS3Q99687 375 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 TSEN34Q9BSV6 310 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 PLA2G12BQ9BX93 195 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 USP44Q9H0E7 712 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 BICC1Q9H694 974 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 DICER1Q9UPY3 1922 aaKnown RBP9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 LTBP3Q9NS15 1303 aa9.81□□□□□ -0.84
NECTIN3-209ENST00000488016 PLIN1O60240 522 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 BBOX1O75936 387 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 CSF1RP07333 972 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 FSTL1Q12841 308 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 SOGA3Q5TF21 947 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 DPP8Q6V1X1 898 aaPredicted RBP9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 TMEM57Q8N5G2 664 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 KLHDC4Q8TBB5 520 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 OCSTAMPQ9BR26 566 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 POLLQ9UGP5 575 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 KIF16BQ96L93 1317 aa9.8□□□□□ -0.84
NECTIN3-209ENST00000488016 PPIP5K2O43314 1243 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 MAN1A2O60476 641 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 DDNO94850 711 aaPredicted RBP9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 KLRK1P26718 216 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 INTS6LQ5JSJ4 861 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 ANKRD18AQ8IVF6 992 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 NPAS3Q8IXF0 933 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 LARGE2Q8N3Y3 721 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 PSMD1Q99460 953 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 TRIM34Q9BYJ4 488 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 PUS3Q9BZE2 481 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 API5Q9BZZ5 524 aaKnown RBP9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 UTYO14607 1347 aa9.79□□□□□ -0.84
NECTIN3-209ENST00000488016 RTL9Q8NET4 1388 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 UFL1O94874 794 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 ZKSCAN2Q63HK3 967 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 TBC1D16Q8TBP0 767 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 PANK1Q8TE04 598 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 C1orf115Q9H7X2 142 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 DBNDD1Q9H9R9 158 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 KCNQ5Q9NR82 932 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 MINPP1Q9UNW1 487 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 LRRFIP2Q9Y608 721 aaKnown RBP9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 A0A1B0GUL6 1792 aa9.78□□□□□ -0.84
NECTIN3-209ENST00000488016 ANKRD18BA2A2Z9 1011 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 SOBPA7XYQ1 873 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 YDJCA8MPS7 323 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 TAF5LO75529 589 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 CCT4P50991 539 aaKnown RBP9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 RAB15P59190 212 aa9.77□□□□□ -0.85
NECTIN3-209ENST00000488016 CC2D2BQ6DHV5 1058 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms