RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
TRA2B-214ENST00000487615 NAPAP54920 295 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 SPAG1Q07617 926 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 FKBP15Q5T1M5 1219 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF397Q8NF99 534 aaPredicted RBP13.47□□□□□ -0.25
TRA2B-214ENST00000487615 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
TRA2B-214ENST00000487615 CTAGE1Q96RT6 745 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 SEC31BQ9NQW1 1179 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 KIAA1328Q86T90 577 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 TXLNBQ8N3L3 684 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
TRA2B-214ENST00000487615 WWC3Q9ULE0 1092 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 KCNJ14Q9UNX9 436 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 F8W031 263 aaPredicted RBP13.47□□□□□ -0.25
TRA2B-214ENST00000487615 CASQ1P31415 396 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 UBE4AQ14139 1066 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 NOM1Q5C9Z4 860 aaKnown RBP13.47□□□□□ -0.25
TRA2B-214ENST00000487615 APOA5Q6Q788 366 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 IQUBQ8NA54 791 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 PCDHA7Q9UN72 937 aa13.47□□□□□ -0.25
TRA2B-214ENST00000487615 ZNF500O60304 480 aaPredicted RBP13.46□□□□□ -0.25
TRA2B-214ENST00000487615 MCM7P33993 719 aa13.46□□□□□ -0.25
TRA2B-214ENST00000487615 SDR42E1Q8WUS8 393 aa13.46□□□□□ -0.25
TRA2B-214ENST00000487615 IDEP14735 1019 aa13.46□□□□□ -0.25
TRA2B-214ENST00000487615 TSGA10IPQ3SY00 556 aa13.46□□□□□ -0.25
TRA2B-214ENST00000487615 FGFR1OPO95684 399 aaKnown RBP13.46□□□□□ -0.26
TRA2B-214ENST00000487615 MCAMP43121 646 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 RESTQ13127 1097 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 PICALMQ13492 652 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 C6orf50Q9HD87 102 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 RTEL1Q9NZ71 1219 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.26
TRA2B-214ENST00000487615 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 NLRP12P59046 1061 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 ATG9AQ7Z3C6 839 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.262e-6■□□□□ 11.1
TRA2B-214ENST00000487615 ZNF219Q9P2Y4 722 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 RCOR1Q9UKL0 485 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 VWA3AA6NCI4 1184 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 USP17L12C9JPN9 530 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 USP17L21D6R901 530 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 UFL1O94874 794 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 ZNF174Q15697 407 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 TRIM47Q96LD4 638 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 TSG101Q99816 390 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 CGNQ9P2M7 1197 aaKnown RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 ERLIN1O75477 346 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 PFKFB1P16118 471 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
TRA2B-214ENST00000487615 NOSTRINQ8IVI9 506 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 SYNE4Q8N205 404 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 RUFY1Q96T51 708 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 TNKSO95271 1327 aa13.45□□□□□ -0.26
TRA2B-214ENST00000487615 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 SPECC1Q5M775 1068 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 C17orf53Q8N3J3 647 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 ALDH8A1Q9H2A2 487 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 A0A1W2PQ27 194 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 A0A1W2PQ64 194 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 A0A1W2PQD8 194 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 CMA1P23946 247 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 GNA11P29992 359 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 GNG11P61952 73 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 SUSD4Q5VX71 490 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 RRP36Q96EU6 259 aaKnown RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 PIH1D3Q9NQM4 214 aaKnown RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 MRVI1Q9Y6F6 885 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 PXDNQ92626 1479 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 CYP19A1P11511 503 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 TMCO3Q6UWJ1 677 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
TRA2B-214ENST00000487615 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 EXOC1Q9NV70 894 aa13.44□□□□□ -0.26
TRA2B-214ENST00000487615 PSMA7O14818 248 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 STX17P56962 302 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 FAM114A1Q8IWE2 563 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 C3P01024 1663 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 TUBB4AP04350 444 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 RASGRF1Q13972 1273 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 PPP4R3BQ5MIZ7 849 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 CERS3Q8IU89 383 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 USP21Q9UK80 565 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 CLIC4Q9Y696 253 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 KIF20AO95235 890 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
TRA2B-214ENST00000487615 TERF1P54274 439 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 SPA17Q15506 151 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 POLR3EQ9NVU0 708 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 ARPP21Q9UBL0 812 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms