RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 HDLBPQ00341 1268 aaKnown RBP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 MECOMQ03112 1051 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 DLGAP5Q15398 846 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 CFAP100Q494V2 611 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 DZIP1Q86YF9 867 aaKnown RBP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 TEKT1Q969V4 418 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 EDC3Q96F86 508 aaKnown RBP12.96□□□□□ -0.33
TOP3B-216ENST00000487485 MRIQ9BWK5 157 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 SERPINA10Q9UK55 444 aa12.96□□□□□ -0.33
TOP3B-216ENST00000487485 AOX1Q06278 1338 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 IGSF3O75054 1194 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 IDH1O75874 414 aaKnown RBP12.95□□□□□ -0.34
TOP3B-216ENST00000487485 ZBTB48P10074 688 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-216ENST00000487485 GJA5P36382 358 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 CRHR2Q13324 411 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 DIXDC1Q155Q3 683 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 MTMR14Q8NCE2 650 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 ARMC5Q96C12 935 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 NSUN4Q96CB9 384 aaKnown RBP12.95□□□□□ -0.34
TOP3B-216ENST00000487485 ERO1AQ96HE7 468 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 PTPN18Q99952 460 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 AK9Q5TCS8 1911 aa12.95□□□□□ -0.34
TOP3B-216ENST00000487485 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-216ENST00000487485 LDHCP07864 332 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 GSTO1P78417 241 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 MAP3K12Q12852 859 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 NBPF12Q5TAG4 269 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-216ENST00000487485 SLF2Q8IX21 1173 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-216ENST00000487485 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
TOP3B-216ENST00000487485 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 SPDYE2BA6NHP3 402 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 USP2O75604 605 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-216ENST00000487485 SPDYE6P0CI01 402 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 SP3Q02447 781 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 NAA16Q6N069 864 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-216ENST00000487485 SKAP1Q86WV1 359 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 MAGEB6Q8N7X4 407 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 FAM163AQ96GL9 167 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-216ENST00000487485 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
TOP3B-216ENST00000487485 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-216ENST00000487485 TRIM6-TRIM34B2RNG4 842 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 MYO1BO43795 1136 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 SUPT20HL1Q3ZLR7 823 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 OTUD7BQ6GQQ9 843 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.348e-14■■■□□ 18
TOP3B-216ENST00000487485 DAGLAQ9Y4D2 1042 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 PPP2R3BQ9Y5P8 575 aa12.92□□□□□ -0.34
TOP3B-216ENST00000487485 SZT2Q5T011 3432 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 MROH7-TTC4A0A0A0MT08 1334 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 GAKO14976 1311 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 TESPA1A2RU30 521 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-216ENST00000487485 UNCXA6NJT0 531 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 CYP7A1P22680 504 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
TOP3B-216ENST00000487485 TTC22Q5TAA0 569 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 APOBEC3HQ6NTF7 200 aaKnown RBP12.91□□□□□ -0.34
TOP3B-216ENST00000487485 TMED8Q6PL24 325 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-216ENST00000487485 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 EVI5LQ96CN4 794 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 ZNF333Q96JL9 665 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 TMEM106CQ9BVX2 250 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 TDRD3Q9H7E2 651 aaKnown RBP12.91□□□□□ -0.34
TOP3B-216ENST00000487485 VEZTQ9HBM0 779 aa12.91□□□□□ -0.34
TOP3B-216ENST00000487485 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
TOP3B-216ENST00000487485 GPR75-ASB3A0A0A6YYF3 556 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 PDE6AP16499 860 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 ADD2P35612 726 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 BTDP43251 543 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 RGS3P49796 1198 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 RASA3Q14644 834 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 ADGRA1Q86SQ6 560 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 NOL10Q9BSC4 688 aaKnown RBP12.9□□□□□ -0.34
TOP3B-216ENST00000487485 FSD1Q9BTV5 496 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 USP40Q9NVE5 1235 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 ZNF70Q9UC06 446 aaPredicted RBP12.9□□□□□ -0.34
TOP3B-216ENST00000487485 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
TOP3B-216ENST00000487485 CDK5RAP2Q96SN8 1893 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 BAG3O95817 575 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 MYCP01106 439 aaPredicted RBP12.89□□□□□ -0.35
TOP3B-216ENST00000487485 CHGBP05060 677 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 GSPT1P15170 499 aaKnown RBP12.89□□□□□ -0.35
TOP3B-216ENST00000487485 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 LRRFIP1Q32MZ4 808 aaKnown RBP12.89□□□□□ -0.35
TOP3B-216ENST00000487485 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 CDC42EP5Q6NZY7 148 aa12.89□□□□□ -0.35
TOP3B-216ENST00000487485 ANKRD13AQ8IZ07 590 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms