RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 SMC4Q9NTJ3 1288 aa24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 BIN2Q9UBW5 565 aaPredicted RBP24.21■■□□□ 1.47
SMPDL3A-202ENST00000487215 ZBTB22O15209 634 aa24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 PTPRAP18433 802 aa24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 ADORA1P30542 326 aa24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 IL15P40933 162 aaPredicted RBP24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 UBXN2AP68543 259 aa24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 FASTKD5Q7L8L6 764 aaKnown RBP24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 GABRQQ9UN88 632 aa24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 PA2G4Q9UQ80 394 aaKnown RBP24.2■■□□□ 1.46
SMPDL3A-202ENST00000487215 CCDC102BQ68D86 513 aa24.19■■□□□ 1.46
SMPDL3A-202ENST00000487215 ZGPATQ8N5A5 531 aaKnown RBP24.19■■□□□ 1.46
SMPDL3A-202ENST00000487215 SLAIN1Q8ND83 568 aa24.19■■□□□ 1.46
SMPDL3A-202ENST00000487215 AFG3L2Q9Y4W6 797 aa24.19■■□□□ 1.46
SMPDL3A-202ENST00000487215 SLURP2P0DP57 97 aa24.18■■□□□ 1.46
SMPDL3A-202ENST00000487215 MAP3K10Q02779 954 aa24.18■■□□□ 1.46
SMPDL3A-202ENST00000487215 GADL1Q6ZQY3 521 aa24.18■■□□□ 1.46
SMPDL3A-202ENST00000487215 ZSCAN29Q8IWY8 852 aaPredicted RBP24.18■■□□□ 1.46
SMPDL3A-202ENST00000487215 LRRFIP2Q9Y608 721 aaKnown RBP24.18■■□□□ 1.46
SMPDL3A-202ENST00000487215 DDTLA6NHG4 134 aaPredicted RBP24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 RASGRF1Q13972 1273 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 DZIP1Q86YF9 867 aaKnown RBP24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 U2AF1L4Q8WU68 220 aaKnown RBP24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 HTATIP2Q9BUP3 242 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 UNC93B1Q9H1C4 597 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 DDX4Q9NQI0 724 aaKnown RBP24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 RBM27Q9P2N5 1060 aaKnown RBP24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 SLC45A1Q9Y2W3 748 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 MGAMO43451 1857 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 CEP290O15078 2479 aa24.17■■□□□ 1.46
SMPDL3A-202ENST00000487215 MYH2Q9UKX2 1941 aa24.16■■□□□ 1.46
SMPDL3A-202ENST00000487215 CDCA7LQ96GN5 454 aa24.16■■□□□ 1.46
SMPDL3A-202ENST00000487215 COPRSQ9NQ92 184 aa24.16■■□□□ 1.46
SMPDL3A-202ENST00000487215 ABCF2Q9UG63 623 aa24.16■■□□□ 1.46
SMPDL3A-202ENST00000487215 PDS5AQ29RF7 1337 aaKnown RBP24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 ADCY3O60266 1144 aa24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 FLT3LGP49771 235 aa24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 PICALMQ13492 652 aa24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 FAM163AQ96GL9 167 aaPredicted RBP24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 TRIOBPQ9H2D6 2365 aa24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 DOCK1Q14185 1865 aa24.15■■□□□ 1.46
SMPDL3A-202ENST00000487215 CTNND1O60716 968 aaKnown RBP24.14■■□□□ 1.45
SMPDL3A-202ENST00000487215 FARP2O94887 1054 aaPredicted RBP24.14■■□□□ 1.45
SMPDL3A-202ENST00000487215 BTDP43251 543 aa24.14■■□□□ 1.45
SMPDL3A-202ENST00000487215 SLF2Q8IX21 1173 aa24.14■■□□□ 1.45
SMPDL3A-202ENST00000487215 NOB1Q9ULX3 412 aaKnown RBP24.14■■□□□ 1.45
SMPDL3A-202ENST00000487215 MROH7-TTC4A0A0A0MT08 1334 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 TRIM75PA6NK02 468 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 SGPL1O95470 568 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 ELNP15502 786 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 TIMM10P62072 90 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 CCDC84Q86UT8 332 aaPredicted RBP24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 SMCR8Q8TEV9 937 aaPredicted RBP24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 HDAC5Q9UQL6 1122 aa24.13■■□□□ 1.45
SMPDL3A-202ENST00000487215 PHIPQ8WWQ0 1821 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 PTPRFP10586 1907 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 TNPO2O14787 897 aaKnown RBP24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 INHAP05111 366 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 PXYLP1Q8TE99 480 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 MEIS3Q99687 375 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 PRO3102Q9H379 93 aa24.12■■□□□ 1.45
SMPDL3A-202ENST00000487215 IRF5Q13568 498 aa24.11■■□□□ 1.45
SMPDL3A-202ENST00000487215 SPTY2D1Q68D10 685 aaPredicted RBP24.11■■□□□ 1.45
SMPDL3A-202ENST00000487215 API5Q9BZZ5 524 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-202ENST00000487215 AGTPBP1Q9UPW5 1226 aa24.11■■□□□ 1.45
SMPDL3A-202ENST00000487215 NR2E3Q9Y5X4 410 aa24.11■■□□□ 1.45
SMPDL3A-202ENST00000487215 A0A1B0GUL7 405 aa24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 RHBDL3P58872 404 aa24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 MECOMQ03112 1051 aa24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 TRMT2AQ8IZ69 625 aaKnown RBP24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 ZNF384Q8TF68 577 aa24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 XAGE2Q96GT9 111 aa24.1■■□□□ 1.45
SMPDL3A-202ENST00000487215 SZT2Q5T011 3432 aa24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 GPR75-ASB3A0A0A6YYF3 556 aa24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 ZBTB7BO15156 539 aaPredicted RBP24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 TREML2Q5T2D2 321 aa24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 ERICH6Q7L0X2 663 aa24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 ANKRD13CQ8N6S4 541 aa24.09■■□□□ 1.45
SMPDL3A-202ENST00000487215 FAM196BA6NMK8 535 aa24.08■■□□□ 1.45
SMPDL3A-202ENST00000487215 TBC1D12O60347 775 aa24.08■■□□□ 1.45
SMPDL3A-202ENST00000487215 TFCP2Q12800 502 aa24.08■■□□□ 1.45
SMPDL3A-202ENST00000487215 MVPQ14764 893 aaKnown RBP24.08■■□□□ 1.45
SMPDL3A-202ENST00000487215 DEFB118Q96PH6 123 aa24.08■■□□□ 1.45
SMPDL3A-202ENST00000487215 RANBP2P49792 3224 aaKnown RBP24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 NPM3O75607 178 aaKnown RBP24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 CT47B1P0C2W7 299 aaPredicted RBP24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 PAK6Q9NQU5 681 aaPredicted RBP24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 PNMA3Q9UL41 463 aa24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 TAOK2Q9UL54 1235 aa24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 AKAP2Q9Y2D5 859 aa24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.07■■□□□ 1.44
SMPDL3A-202ENST00000487215 SRGAP3O43295 1099 aa24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 TFRCP02786 760 aaKnown RBP24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 FAM110CQ1W6H9 321 aa24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 PROCA1Q8NCQ7 364 aaPredicted RBP24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 COA7Q96BR5 231 aa24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 HMG20BQ9P0W2 317 aa24.06■■□□□ 1.44
SMPDL3A-202ENST00000487215 CAPN2P17655 700 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms