RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 GJA5P36382 358 aa27.28■■□□□ 1.96
CDHR3-212ENST00000487084 CNKSR2Q8WXI2 1034 aa27.28■■□□□ 1.96
CDHR3-212ENST00000487084 ZKSCAN4Q969J2 545 aaPredicted RBP27.28■■□□□ 1.96
CDHR3-212ENST00000487084 DNAJC2Q99543 621 aaKnown RBP27.28■■□□□ 1.96
CDHR3-212ENST00000487084 CYP7A1P22680 504 aa27.27■■□□□ 1.96
CDHR3-212ENST00000487084 TM4SF4P48230 202 aa27.27■■□□□ 1.96
CDHR3-212ENST00000487084 ADGRA1Q86SQ6 560 aa27.27■■□□□ 1.96
CDHR3-212ENST00000487084 SH3RF3Q8TEJ3 882 aaPredicted RBP27.27■■□□□ 1.96
CDHR3-212ENST00000487084 MAP4K4O95819 1239 aaPredicted RBP27.26■■□□□ 1.95
CDHR3-212ENST00000487084 MAP3K12Q12852 859 aa27.26■■□□□ 1.95
CDHR3-212ENST00000487084 SH3BP5LQ7L8J4 393 aa27.26■■□□□ 1.95
CDHR3-212ENST00000487084 MAGEB6Q8N7X4 407 aa27.26■■□□□ 1.95
CDHR3-212ENST00000487084 OTUD5Q96G74 571 aa27.26■■□□□ 1.95
CDHR3-212ENST00000487084 DCTPP1Q9H773 170 aa27.26■■□□□ 1.95
CDHR3-212ENST00000487084 DDTLA6NHG4 134 aaPredicted RBP27.25■■□□□ 1.95
CDHR3-212ENST00000487084 PLCG2P16885 1265 aa27.25■■□□□ 1.95
CDHR3-212ENST00000487084 INPP5BP32019 993 aa27.25■■□□□ 1.95
CDHR3-212ENST00000487084 SNCAIPQ9Y6H5 919 aa27.25■■□□□ 1.95
CDHR3-212ENST00000487084 GOLIM4O00461 696 aa27.24■■□□□ 1.95
CDHR3-212ENST00000487084 IGSF3O75054 1194 aa27.24■■□□□ 1.95
CDHR3-212ENST00000487084 TTF1Q15361 905 aaPredicted RBP27.24■■□□□ 1.95
CDHR3-212ENST00000487084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.24■■□□□ 1.95
CDHR3-212ENST00000487084 BOLA2Q9H3K6 86 aa27.24■■□□□ 1.95
CDHR3-212ENST00000487084 MYO5AQ9Y4I1 1855 aaKnown RBP27.23■■□□□ 1.95
CDHR3-212ENST00000487084 TBC1D8O95759 1140 aa27.23■■□□□ 1.95
CDHR3-212ENST00000487084 INHBEP58166 350 aa27.22■■□□□ 1.95
CDHR3-212ENST00000487084 MIGA1Q8NAN2 632 aa27.22■■□□□ 1.95
CDHR3-212ENST00000487084 OSBPL5Q9H0X9 879 aaPredicted RBP27.22■■□□□ 1.95
CDHR3-212ENST00000487084 ATRNL1Q5VV63 1379 aa27.22■■□□□ 1.95
CDHR3-212ENST00000487084 DOCK2Q92608 1830 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 SPDYE5A6NIY4 337 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 NPM3O75607 178 aaKnown RBP27.21■■□□□ 1.95
CDHR3-212ENST00000487084 PPP4CP60510 307 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 DYNLL1P63167 89 aaKnown RBP27.21■■□□□ 1.95
CDHR3-212ENST00000487084 ERO1BQ86YB8 467 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 IFNL1Q8IU54 200 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 TGFBRAP1Q8WUH2 860 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 EDC3Q96F86 508 aaKnown RBP27.21■■□□□ 1.95
CDHR3-212ENST00000487084 ZNF112Q9UJU3 913 aa27.21■■□□□ 1.95
CDHR3-212ENST00000487084 SLURP2P0DP57 97 aa27.2■■□□□ 1.94
CDHR3-212ENST00000487084 ATP5JP18859 108 aa27.2■■□□□ 1.94
CDHR3-212ENST00000487084 MAPKAPK5Q8IW41 473 aa27.2■■□□□ 1.94
CDHR3-212ENST00000487084 IGF2BP3O00425 579 aaKnown RBP eCLIP27.19■■□□□ 1.94
CDHR3-212ENST00000487084 PAG1Q9NWQ8 432 aa27.19■■□□□ 1.94
CDHR3-212ENST00000487084 ALDH1A1P00352 501 aa27.18■■□□□ 1.94
CDHR3-212ENST00000487084 GTF2A2P52657 109 aa27.18■■□□□ 1.94
CDHR3-212ENST00000487084 SLC9C2Q5TAH2 1124 aa27.18■■□□□ 1.94
CDHR3-212ENST00000487084 IFFO2Q5TF58 517 aa27.18■■□□□ 1.94
CDHR3-212ENST00000487084 FLT1P17948 1338 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 CCL15-CCL14A0A0B4J2E2 113 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 CCL15Q16663 113 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 OTUD7BQ6GQQ9 843 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 GPATCH3Q96I76 525 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 MS4A4AQ96JQ5 239 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 HAUS7Q99871 368 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.17■■□□□ 1.942e-7■■■□□ 15.1
CDHR3-212ENST00000487084 CASP8AP2Q9UKL3 1982 aa27.17■■□□□ 1.94
CDHR3-212ENST00000487084 FAM196BA6NMK8 535 aa27.16■■□□□ 1.94
CDHR3-212ENST00000487084 IRF6O14896 467 aa27.16■■□□□ 1.94
CDHR3-212ENST00000487084 PDE6AP16499 860 aa27.16■■□□□ 1.94
CDHR3-212ENST00000487084 PPIL2Q13356 520 aa27.16■■□□□ 1.94
CDHR3-212ENST00000487084 NOL9Q5SY16 702 aaKnown RBP27.16■■□□□ 1.94
CDHR3-212ENST00000487084 TMED8Q6PL24 325 aaPredicted RBP27.16■■□□□ 1.94
CDHR3-212ENST00000487084 ECHDC1Q9NTX5 307 aa27.16■■□□□ 1.94
CDHR3-212ENST00000487084 SUPT16HQ9Y5B9 1047 aaKnown RBP27.16■■□□□ 1.94
CDHR3-212ENST00000487084 COL2A1P02458 1487 aaPredicted RBP27.16■■□□□ 1.94
CDHR3-212ENST00000487084 PHF20L1A8MW92 1017 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 USP5P45974 858 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 PPATQ06203 517 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 TSHZ3Q63HK5 1081 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 CERS3Q8IU89 383 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 BRI3BPQ8WY22 251 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 PTPN18Q99952 460 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 PICK1Q9NRD5 415 aa27.15■■□□□ 1.94
CDHR3-212ENST00000487084 SAP30BPQ9UHR5 308 aaKnown RBP27.15■■□□□ 1.94
CDHR3-212ENST00000487084 SNAPC2Q13487 334 aa27.14■■□□□ 1.94
CDHR3-212ENST00000487084 SCYL3Q8IZE3 742 aa27.14■■□□□ 1.94
CDHR3-212ENST00000487084 ZNF532Q9HCE3 1301 aa27.14■■□□□ 1.93
CDHR3-212ENST00000487084 MAGEB6P1A0A0J9YX57 407 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 TESPA1A2RU30 521 aaPredicted RBP27.13■■□□□ 1.93
CDHR3-212ENST00000487084 CETPP11597 493 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 MAP3K10Q02779 954 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 SLC4A8Q2Y0W8 1093 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 DHX36Q9H2U1 1008 aaKnown RBP27.13■■□□□ 1.93
CDHR3-212ENST00000487084 R3HDMLQ9H3Y0 253 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 ZBTB47Q9UFB7 747 aaPredicted RBP27.13■■□□□ 1.93
CDHR3-212ENST00000487084 PALD1Q9ULE6 856 aa27.13■■□□□ 1.93
CDHR3-212ENST00000487084 TBC1D12O60347 775 aa27.12■■□□□ 1.93
CDHR3-212ENST00000487084 CAPN15O75808 1086 aa27.12■■□□□ 1.93
CDHR3-212ENST00000487084 ZNF296Q8WUU4 475 aaPredicted RBP27.12■■□□□ 1.93
CDHR3-212ENST00000487084 TRIM34Q9BYJ4 488 aa27.12■■□□□ 1.93
CDHR3-212ENST00000487084 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.12■■□□□ 1.93
CDHR3-212ENST00000487084 PI4KBQ9UBF8 816 aa27.12■■□□□ 1.93
CDHR3-212ENST00000487084 LAMB1P07942 1786 aa27.12■■□□□ 1.93
CDHR3-212ENST00000487084 GPR25O00155 361 aa27.11■■□□□ 1.93
CDHR3-212ENST00000487084 CTNND1O60716 968 aaKnown RBP27.11■■□□□ 1.93
CDHR3-212ENST00000487084 DGKZQ13574 1117 aa27.11■■□□□ 1.93
CDHR3-212ENST00000487084 EXOC6Q8TAG9 804 aa27.11■■□□□ 1.93
CDHR3-212ENST00000487084 CFHR5Q9BXR6 569 aa27.11■■□□□ 1.93
CDHR3-212ENST00000487084 HLA-DOAP06340 250 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms