RNA–Protein interactions for RNA: ENST00000487040.1

ECHDC2-213, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 3

Gene ECHDC2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-213ENST00000487040 MAP3K9P80192 1104 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 KIF23Q02241 960 aaPredicted RBP15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 PICALMQ13492 652 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 SLC9C2Q5TAH2 1124 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 ANKRD45Q5TZF3 282 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 SMC5Q8IY18 1101 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 DDX4Q9NQI0 724 aaKnown RBP15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 CSADQ9Y600 493 aa15.33■□□□□ 0.04
ECHDC2-213ENST00000487040 PDE6AP16499 860 aa15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 ZSCAN25Q6NSZ9 544 aa15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 ZSCAN29Q8IWY8 852 aaPredicted RBP15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 ZFPM1Q8IX07 1006 aa15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 OSBPL5Q9H0X9 879 aaPredicted RBP15.32■□□□□ 0.04
ECHDC2-213ENST00000487040 GLRX3O76003 335 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 MX1P20591 662 aa15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 CLMNQ96JQ2 1002 aa15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 WRNIP1Q96S55 665 aa15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 DHX36Q9H2U1 1008 aaKnown RBP15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 OTOFQ9HC10 1997 aa15.31■□□□□ 0.04
ECHDC2-213ENST00000487040 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 CTCFP49711 727 aaPredicted RBP15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 MAP3K10Q02779 954 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 SREBF2Q12772 1141 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 VGLL4Q14135 290 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 AK9Q5TCS8 1911 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 SH3BP5LQ7L8J4 393 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 MIGA1Q8NAN2 632 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 EDC3Q96F86 508 aaKnown RBP15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 WNK4Q96J92 1243 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 ZIC5Q96T25 663 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 ZNF532Q9HCE3 1301 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
ECHDC2-213ENST00000487040 FLT1P17948 1338 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 SALL3Q9BXA9 1300 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 MAGEB6P1A0A0J9YX57 407 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 TCRBV5S4A2TA0A5A2 114 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 MANSC4A6NHS7 340 aaPredicted RBP15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 TBC1D12O60347 775 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 ADD2P35612 726 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 INHBEP58166 350 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 DYNLL1P63167 89 aaKnown RBP15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 LRRFIP1Q32MZ4 808 aaKnown RBP15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 TGFBRAP1Q8WUH2 860 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 ELP3Q9H9T3 547 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 SAGE1Q9NXZ1 904 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 FOCADQ5VW36 1801 aa15.29■□□□□ 0.04
ECHDC2-213ENST00000487040 SPDYE5A6NIY4 337 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 FOXN1O15353 648 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 IGHDP01880 384 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 USP5P45974 858 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 TM4SF4P48230 202 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 IRX6P78412 446 aaPredicted RBP15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 NOL9Q5SY16 702 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 TSHZ3Q63HK5 1081 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 ERO1BQ86YB8 467 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 MAPKAPK5Q8IW41 473 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 KBTBD3Q8NAB2 608 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 PI4K2BQ8TCG2 481 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 OTUD7AQ8TE49 926 aaPredicted RBP15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 PI4KBQ9UBF8 816 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 HERC5Q9UII4 1024 aaKnown RBP15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 SNCAIPQ9Y6H5 919 aa15.28■□□□□ 0.04
ECHDC2-213ENST00000487040 LAMB1P07942 1786 aa15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 NUCB1Q02818 461 aa15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 MKRN3Q13064 507 aaKnown RBP15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 ZKSCAN4Q969J2 545 aaPredicted RBP15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 CRNKL1Q9BZJ0 848 aaKnown RBP15.27■□□□□ 0.04
ECHDC2-213ENST00000487040 CDK5RAP2Q96SN8 1893 aa15.27■□□□□ 0.03
ECHDC2-213ENST00000487040 MYH7P12883 1935 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 PHF20L1A8MW92 1017 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 HLA-DOAP06340 250 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 INPP5BP32019 993 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 PPATQ06203 517 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 CHD1LQ86WJ1 897 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 LNPKQ9C0E8 428 aa15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.26■□□□□ 0.03
ECHDC2-213ENST00000487040 CTNND1O60716 968 aaKnown RBP15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 ALDH1A1P00352 501 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 HSPA8P11142 646 aaKnown RBP15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 GJA5P36382 358 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 GTF2A2P52657 109 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 PDE1AP54750 535 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 PPIL2Q13356 520 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 FOXP4Q8IVH2 680 aaPredicted RBP15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 SCYL3Q8IZE3 742 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 OTUD5Q96G74 571 aa15.25■□□□□ 0.03
ECHDC2-213ENST00000487040 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms