RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SCYL3Q8IZE3 742 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 UBE2OQ9C0C9 1292 aaKnown RBP9.64□□□□□ -0.87
PDPN-205ENST00000487038 NBPF3Q9H094 633 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
PDPN-205ENST00000487038 ZMYND8Q9ULU4 1186 aaPredicted RBP9.64□□□□□ -0.87
PDPN-205ENST00000487038 RPTORQ8N122 1335 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 PRUNE2Q8WUY3 3088 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 MAGEA10P43363 369 aaPredicted RBP9.63□□□□□ -0.87
PDPN-205ENST00000487038 TCP10Q12799 353 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 CCDC27Q2M243 656 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 METTL24Q5JXM2 366 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 DIS3LQ8TF46 1054 aaKnown RBP9.63□□□□□ -0.87
PDPN-205ENST00000487038 C11orf49Q9H6J7 331 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 HMX1Q9NP08 348 aaPredicted RBP9.63□□□□□ -0.87
PDPN-205ENST00000487038 DNAH12Q6ZR08 3092 aa9.63□□□□□ -0.87
PDPN-205ENST00000487038 IL16Q14005 1332 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 LTBP2Q14767 1821 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 PDE8BO95263 885 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
PDPN-205ENST00000487038 SYN1P17600 705 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 EPHA10Q5JZY3 1008 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 WDR66Q8TBY9 1149 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 ZHX2Q9Y6X8 837 aa9.62□□□□□ -0.87
PDPN-205ENST00000487038 COL2A1P02458 1487 aaPredicted RBP9.61□□□□□ -0.87
PDPN-205ENST00000487038 F6X3S4 739 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 ALDH1L1O75891 902 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.87
PDPN-205ENST00000487038 ANKRD13CQ8N6S4 541 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 PUS3Q9BZE2 481 aaKnown RBP9.61□□□□□ -0.87
PDPN-205ENST00000487038 SRCIN1Q9C0H9 1055 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 AGTPBP1Q9UPW5 1226 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 LRRFIP2Q9Y608 721 aaKnown RBP9.61□□□□□ -0.87
PDPN-205ENST00000487038 BDP1A6H8Y1 2624 aa9.61□□□□□ -0.87
PDPN-205ENST00000487038 FANCIQ9NVI1 1328 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 MUC3AQ02505 3323 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 PTPRAP18433 802 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 GCLCP48506 637 aaPredicted RBP9.6□□□□□ -0.87
PDPN-205ENST00000487038 DDX10Q13206 875 aaKnown RBP9.6□□□□□ -0.87
PDPN-205ENST00000487038 PUM3Q15397 648 aaKnown RBP9.6□□□□□ -0.87
PDPN-205ENST00000487038 FAM109BQ6ICB4 259 aaPredicted RBP9.6□□□□□ -0.87
PDPN-205ENST00000487038 CDC42EP5Q6NZY7 148 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 ZSCAN29Q8IWY8 852 aaPredicted RBP9.6□□□□□ -0.87
PDPN-205ENST00000487038 WWC1Q8IX03 1113 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 DAGLAQ9Y4D2 1042 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 AFG3L2Q9Y4W6 797 aa9.6□□□□□ -0.87
PDPN-205ENST00000487038 TRIM75PA6NK02 468 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 ENTPD3O75355 529 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 LDHBP07195 334 aaKnown RBP9.59□□□□□ -0.87
PDPN-205ENST00000487038 SLC5A1P13866 664 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 NFIAQ12857 509 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 ZNF697Q5TEC3 545 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 SLC4A10Q6U841 1118 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 VGLL2Q8N8G2 317 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
PDPN-205ENST00000487038 SUCLG2Q96I99 432 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 TBC1D2Q9BYX2 928 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 PRKRIP1Q9H875 184 aaPredicted RBP9.59□□□□□ -0.87
PDPN-205ENST00000487038 USP40Q9NVE5 1235 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 FAM198AQ9UFP1 575 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 OGDHLQ9ULD0 1010 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 ATRNL1Q5VV63 1379 aa9.59□□□□□ -0.87
PDPN-205ENST00000487038 PHF20L1A8MW92 1017 aa9.58□□□□□ -0.88
PDPN-205ENST00000487038 CTNND1O60716 968 aaKnown RBP9.58□□□□□ -0.88
PDPN-205ENST00000487038 DIXDC1Q155Q3 683 aa9.58□□□□□ -0.88
PDPN-205ENST00000487038 LRRC24Q50LG9 513 aa9.58□□□□□ -0.88
PDPN-205ENST00000487038 ZGPATQ8N5A5 531 aaKnown RBP9.58□□□□□ -0.88
PDPN-205ENST00000487038 BICC1Q9H694 974 aaKnown RBP9.58□□□□□ -0.88
PDPN-205ENST00000487038 GNL3LQ9NVN8 582 aaKnown RBP9.58□□□□□ -0.88
PDPN-205ENST00000487038 PFASO15067 1338 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 VAMP4O75379 141 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 PRDX5P30044 214 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 RGS3P49796 1198 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 MDM2Q00987 491 aaPredicted RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 RABL6Q3YEC7 729 aaPredicted RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 NCBP3Q53F19 620 aaKnown RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 SOCS4Q8WXH5 440 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 LPIN2Q92539 896 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 GUCD1Q96NT3 240 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 LBHD1Q9BQE6 289 aaPredicted RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 IDI2Q9BXS1 227 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 SPINK5Q9NQ38 1064 aaPredicted RBP9.57□□□□□ -0.88
PDPN-205ENST00000487038 PRDM6Q9NQX0 595 aa9.57□□□□□ -0.88
PDPN-205ENST00000487038 UTYO14607 1347 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 FOCADQ5VW36 1801 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 RFX7Q2KHR2 1363 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 SEMA3EO15041 775 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 NBPF7P0C2Y1 421 aaPredicted RBP9.56□□□□□ -0.88
PDPN-205ENST00000487038 PRKAR2AP13861 404 aaKnown RBP9.56□□□□□ -0.88
PDPN-205ENST00000487038 FGFR2P21802 821 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 PDE3AQ14432 1141 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 TREML2Q5T2D2 321 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 TRIB2Q92519 343 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms