RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 DIXDC1Q155Q3 683 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 NSUN7Q8NE18 718 aaKnown RBP25.42■■□□□ 1.66
TRADD-202ENST00000486556 ESR2Q92731 530 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 C10orf71Q711Q0 1435 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 CHD4Q14839 1912 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 SLC3A2P08195 630 aaKnown RBP25.42■■□□□ 1.66
TRADD-202ENST00000486556 NT5C2P49902 561 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 NKX2-3Q8TAU0 364 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 TOMM22Q9NS69 142 aa25.42■■□□□ 1.66
TRADD-202ENST00000486556 SLX4Q8IY92 1834 aa25.41■■□□□ 1.66
TRADD-202ENST00000486556 IFIT3O14879 490 aaKnown RBP25.41■■□□□ 1.66
TRADD-202ENST00000486556 TMEM67Q5HYA8 995 aa25.41■■□□□ 1.66
TRADD-202ENST00000486556 MKRN1Q9UHC7 482 aaKnown RBP25.41■■□□□ 1.66
TRADD-202ENST00000486556 JAK2O60674 1132 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 CTDNEP1O95476 244 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 RRP12Q5JTH9 1297 aaKnown RBP25.4■■□□□ 1.66
TRADD-202ENST00000486556 FAM184AQ8NB25 1140 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 LY9Q9HBG7 655 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 HPS5Q9UPZ3 1129 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 GAKO14976 1311 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 ERICH2A1L162 156 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 GOLGA8BA8MQT2 603 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 USP5P45974 858 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 DOK7Q18PE1 504 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 SUPT20HQ8NEM7 779 aa25.4■■□□□ 1.66
TRADD-202ENST00000486556 SH3RF3Q8TEJ3 882 aaPredicted RBP25.39■■□□□ 1.65
TRADD-202ENST00000486556 NCOA5Q9HCD5 579 aaKnown RBP25.39■■□□□ 1.65
TRADD-202ENST00000486556 PTPDC1A2A3K4 754 aa25.38■■□□□ 1.65
TRADD-202ENST00000486556 BTDP43251 543 aa25.38■■□□□ 1.65
TRADD-202ENST00000486556 TTLL6Q8N841 843 aa25.38■■□□□ 1.65
TRADD-202ENST00000486556 LMBRD1Q9NUN5 540 aa25.38■■□□□ 1.65
TRADD-202ENST00000486556 MYH2Q9UKX2 1941 aa25.38■■□□□ 1.65
TRADD-202ENST00000486556 VPS37CA5D8V6 355 aaPredicted RBP25.37■■□□□ 1.65
TRADD-202ENST00000486556 ORC4O43929 436 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 FKBP1AP62942 108 aaKnown RBP25.37■■□□□ 1.65
TRADD-202ENST00000486556 APOA5Q6Q788 366 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 NFXL1Q6ZNB6 911 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 AMOTL1Q8IY63 956 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 MCM9Q9NXL9 1143 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 SYNE3Q6ZMZ3 975 aa25.37■■□□□ 1.65
TRADD-202ENST00000486556 BAZ2AQ9UIF9 1905 aaKnown RBP25.36■■□□□ 1.65
TRADD-202ENST00000486556 CYP2D7A0A087X1C5 515 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 CCDC69A6NI79 296 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 DTNBO60941 627 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 PDE4BQ07343 736 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 GSE1Q14687 1217 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 WTAPQ15007 396 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 DDX11Q96FC9 970 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 UBAC1Q9BSL1 405 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.36■■□□□ 1.65
TRADD-202ENST00000486556 SLC12A7Q9Y666 1083 aa25.36■■□□□ 1.65
TRADD-202ENST00000486556 SOCS7O14512 581 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 CPLX1O14810 134 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 ZBTB43O43298 467 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 METAP2P50579 478 aaKnown RBP eCLIP25.35■■□□□ 1.65
TRADD-202ENST00000486556 RCAN1P53805 252 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 C12orf60Q5U649 245 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 STK11IPQ8N1F8 1099 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 PRPF40AO75400 957 aaKnown RBP25.35■■□□□ 1.65
TRADD-202ENST00000486556 STRIP1Q5VSL9 837 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 IQCA1Q86XH1 822 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 TGFBRAP1Q8WUH2 860 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
TRADD-202ENST00000486556 SNED1Q8TER0 1413 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 KIAA2012Q0VF49 1180 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 CPLX2Q6PUV4 134 aaKnown RBP25.34■■□□□ 1.65
TRADD-202ENST00000486556 RTKN2Q8IZC4 609 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 CERS5Q8N5B7 392 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 RGS22Q8NE09 1264 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 MRIQ9BWK5 157 aa25.34■■□□□ 1.65
TRADD-202ENST00000486556 ZNF219Q9P2Y4 722 aaPredicted RBP25.34■■□□□ 1.65
TRADD-202ENST00000486556 H3BQV1 296 aa25.33■■□□□ 1.65
TRADD-202ENST00000486556 CDKL5O76039 1030 aa25.33■■□□□ 1.65
TRADD-202ENST00000486556 KLHL40Q2TBA0 621 aa25.33■■□□□ 1.65
TRADD-202ENST00000486556 IFFO2Q5TF58 517 aa25.33■■□□□ 1.65
TRADD-202ENST00000486556 DBNDD1Q9H9R9 158 aa25.33■■□□□ 1.65
TRADD-202ENST00000486556 RANBP6O60518 1105 aaKnown RBP25.33■■□□□ 1.64
TRADD-202ENST00000486556 USP17L8P0C7I0 530 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 RHBDL3P58872 404 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 TGFB2P61812 414 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 CDC37L1Q7L3B6 337 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 TEX11Q8IYF3 940 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 SENP2Q9HC62 589 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 TTF2Q9UNY4 1162 aaKnown RBP25.33■■□□□ 1.64
TRADD-202ENST00000486556 DAGLAQ9Y4D2 1042 aa25.33■■□□□ 1.64
TRADD-202ENST00000486556 SMIM22K7EJ46 135 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 C21orf2O43822 256 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 KCNA3P22001 575 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 PPP2R5BQ15173 497 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 SEC23AQ15436 765 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 HHIPL2Q6UWX4 724 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 ZSCAN10Q96SZ4 725 aaPredicted RBP25.32■■□□□ 1.64
TRADD-202ENST00000486556 ZKSCAN3Q9BRR0 538 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 MTFR1LQ9H019 292 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 ZSCAN16Q9H4T2 348 aaPredicted RBP25.32■■□□□ 1.64
TRADD-202ENST00000486556 DDX49Q9Y6V7 483 aaKnown RBP25.32■■□□□ 1.64
TRADD-202ENST00000486556 DLEC1Q9Y238 1755 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 NID2Q14112 1375 aa25.32■■□□□ 1.64
TRADD-202ENST00000486556 ECE2O60344 883 aa25.31■■□□□ 1.64
TRADD-202ENST00000486556 CCDC93Q567U6 631 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms