RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 IDI2Q9BXS1 227 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 FAM198AQ9UFP1 575 aa15.75■□□□□ 0.11
CHMP3-208ENST00000486404 GPR75-ASB3A0A0A6YYF3 556 aa15.74■□□□□ 0.11
CHMP3-208ENST00000486404 TBC1D8O95759 1140 aa15.74■□□□□ 0.11
CHMP3-208ENST00000486404 IFIT2P09913 472 aaKnown RBP15.74■□□□□ 0.11
CHMP3-208ENST00000486404 DGKZQ13574 1117 aa15.74■□□□□ 0.11
CHMP3-208ENST00000486404 IFNL1Q8IU54 200 aa15.74■□□□□ 0.11
CHMP3-208ENST00000486404 NAV1Q8NEY1 1877 aa15.74■□□□□ 0.11
CHMP3-208ENST00000486404 MYH1P12882 1939 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 WDHD1O75717 1129 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-208ENST00000486404 BAG3O95817 575 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 MAP4K4O95819 1239 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-208ENST00000486404 GJA5P36382 358 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 ZAP70P43403 619 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 TEX11Q8IYF3 940 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-208ENST00000486404 SNCAIPQ9Y6H5 919 aa15.73■□□□□ 0.11
CHMP3-208ENST00000486404 COL2A1P02458 1487 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-208ENST00000486404 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 SPDYE5A6NIY4 337 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 IDH1O75874 414 aaKnown RBP15.72■□□□□ 0.11
CHMP3-208ENST00000486404 CYP2E1P05181 493 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-208ENST00000486404 PLCG2P16885 1265 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 GTF2A2P52657 109 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 CCL15Q16663 113 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 ERO1BQ86YB8 467 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 SIRT2Q8IXJ6 389 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 ZNF384Q8TF68 577 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 ABHD8Q96I13 439 aa15.72■□□□□ 0.11
CHMP3-208ENST00000486404 IGF2BP3O00425 579 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHMP3-208ENST00000486404 IGSF3O75054 1194 aa15.71■□□□□ 0.11
CHMP3-208ENST00000486404 INPP5BP32019 993 aa15.71■□□□□ 0.11
CHMP3-208ENST00000486404 RRP1P56182 461 aaKnown RBP15.71■□□□□ 0.11
CHMP3-208ENST00000486404 RHBDL3P58872 404 aa15.71■□□□□ 0.11
CHMP3-208ENST00000486404 ZFPM1Q8IX07 1006 aa15.71■□□□□ 0.11
CHMP3-208ENST00000486404 MCOLN1Q9GZU1 580 aa15.71■□□□□ 0.11
CHMP3-208ENST00000486404 DDX4Q9NQI0 724 aaKnown RBP15.71■□□□□ 0.11
CHMP3-208ENST00000486404 PIH1D3Q9NQM4 214 aaKnown RBP15.71■□□□□ 0.11
CHMP3-208ENST00000486404 AATFQ9NY61 560 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHMP3-208ENST00000486404 PTPRFP10586 1907 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 GPR25O00155 361 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 PPIL2Q13356 520 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 CTU1Q7Z7A3 348 aaKnown RBP15.7■□□□□ 0.1
CHMP3-208ENST00000486404 SH3RF3Q8TEJ3 882 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-208ENST00000486404 ATRNL1Q5VV63 1379 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
CHMP3-208ENST00000486404 PHIPQ8WWQ0 1821 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 DDTLA6NHG4 134 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-208ENST00000486404 CETPP11597 493 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 MAP3K12Q12852 859 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 TTF1Q15361 905 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-208ENST00000486404 ZNF296Q8WUU4 475 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-208ENST00000486404 DNAJC2Q99543 621 aaKnown RBP15.69■□□□□ 0.1
CHMP3-208ENST00000486404 CFHR5Q9BXR6 569 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 LRRCC1Q9C099 1032 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 OSBPL5Q9H0X9 879 aaPredicted RBP15.69■□□□□ 0.1
CHMP3-208ENST00000486404 PICK1Q9NRD5 415 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 NDUFB9Q9Y6M9 179 aa15.69■□□□□ 0.1
CHMP3-208ENST00000486404 FKTNO75072 461 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 CYP7A1P22680 504 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 PPATQ06203 517 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 CRHR2Q13324 411 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 TAF1CQ15572 869 aaPredicted RBP15.68■□□□□ 0.1
CHMP3-208ENST00000486404 NOM1Q5C9Z4 860 aaKnown RBP15.68■□□□□ 0.1
CHMP3-208ENST00000486404 NOL9Q5SY16 702 aaKnown RBP15.68■□□□□ 0.1
CHMP3-208ENST00000486404 SH3BP5LQ7L8J4 393 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 CERS3Q8IU89 383 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 BRI3BPQ8WY22 251 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 TRIM34Q9BYJ4 488 aa15.68■□□□□ 0.1
CHMP3-208ENST00000486404 MYH8P13535 1937 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 TESPA1A2RU30 521 aaPredicted RBP15.67■□□□□ 0.1
CHMP3-208ENST00000486404 IRF6O14896 467 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 ADGRA1Q86SQ6 560 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 ZNF112Q9UJU3 913 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 DDX60LQ5H9U9 1706 aaKnown RBP15.67■□□□□ 0.1
CHMP3-208ENST00000486404 FLT1P17948 1338 aa15.67■□□□□ 0.1
CHMP3-208ENST00000486404 CCDC85CA6NKD9 419 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 GOLIM4O00461 696 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 TMED8Q6PL24 325 aaPredicted RBP15.66■□□□□ 0.1
CHMP3-208ENST00000486404 MAPKAPK5Q8IW41 473 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 MIGA1Q8NAN2 632 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHMP3-208ENST00000486404 PTPN18Q99952 460 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHMP3-208ENST00000486404 ZFYVE28Q9HCC9 887 aa15.66■□□□□ 0.1
CHMP3-208ENST00000486404 CRACR2BQ8N4Y2 399 aaPredicted RBP15.65■□□□□ 0.1
CHMP3-208ENST00000486404 TGFBRAP1Q8WUH2 860 aa15.65■□□□□ 0.1
CHMP3-208ENST00000486404 GPATCH3Q96I76 525 aa15.65■□□□□ 0.1
CHMP3-208ENST00000486404 DHX36Q9H2U1 1008 aaKnown RBP15.65■□□□□ 0.1
CHMP3-208ENST00000486404 R3HDMLQ9H3Y0 253 aa15.65■□□□□ 0.1
CHMP3-208ENST00000486404 ANTXR1Q9H6X2 564 aa15.65■□□□□ 0.1
CHMP3-208ENST00000486404 LOC285556D6RIA3 1793 aa15.64■□□□□ 0.1
CHMP3-208ENST00000486404 FAM196BA6NMK8 535 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 PHF20L1A8MW92 1017 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 HLA-DOAP06340 250 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms