RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ZC3H12AQ5D1E8 599 aaKnown RBP7.9□□□□□ -1.14
GCFC2-209ENST00000486016 LRRC4CQ9HCJ2 640 aa7.9□□□□□ -1.14
GCFC2-209ENST00000486016 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.14
GCFC2-209ENST00000486016 NEFMP07197 916 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 CDK5R2Q13319 367 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 TTLL4Q14679 1199 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 SULF2Q8IWU5 870 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
GCFC2-209ENST00000486016 BCL7CQ8WUZ0 217 aaPredicted RBP7.89□□□□□ -1.15
GCFC2-209ENST00000486016 GPN3Q9UHW5 284 aaPredicted RBP7.89□□□□□ -1.15
GCFC2-209ENST00000486016 TIMELESSQ9UNS1 1208 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 U3KQE9 123 aa7.89□□□□□ -1.15
GCFC2-209ENST00000486016 NME2P22392 152 aa7.88□□□□□ -1.15
GCFC2-209ENST00000486016 FLCNQ8NFG4 579 aa7.88□□□□□ -1.15
GCFC2-209ENST00000486016 NECAB3Q96P71 396 aaPredicted RBP7.88□□□□□ -1.15
GCFC2-209ENST00000486016 BMP6P22004 513 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 MAPK1P28482 360 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 FMR1Q06787 632 aaKnown RBP eCLIP7.87□□□□□ -1.15
GCFC2-209ENST00000486016 CYP27C1Q4G0S4 372 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 MPRIPQ6WCQ1 1025 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 SPRED2Q7Z698 418 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 KCNB2Q92953 911 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 SETDB2Q96T68 719 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 PIDD1Q9HB75 910 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 AKAP2Q9Y2D5 859 aa7.87□□□□□ -1.15
GCFC2-209ENST00000486016 DBX1A6NMT0 343 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 ENC1O14682 589 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 LEFTY1O75610 366 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 PAPLNO95428 1278 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 FAM87AP0C7U9 286 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 HCLS1P14317 486 aaPredicted RBP7.86□□□□□ -1.15
GCFC2-209ENST00000486016 NTF4P34130 210 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 ERVK-24P63145 666 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 SPOCD1Q6ZMY3 1216 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 ANKRD24Q8TF21 1146 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 OSBPL7Q9BZF2 842 aa7.86□□□□□ -1.15
GCFC2-209ENST00000486016 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
GCFC2-209ENST00000486016 FBF1Q8TES7 1133 aa7.85□□□□□ -1.15
GCFC2-209ENST00000486016 ISL2Q96A47 359 aa7.85□□□□□ -1.15
GCFC2-209ENST00000486016 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
GCFC2-209ENST00000486016 PCOLCE2Q9UKZ9 415 aa7.85□□□□□ -1.15
GCFC2-209ENST00000486016 PAGE1O75459 146 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 RING1Q06587 406 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 RASIP1Q5U651 963 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 MAP1SQ66K74 1059 aaPredicted RBP7.84□□□□□ -1.15
GCFC2-209ENST00000486016 ZNF574Q6ZN55 896 aaPredicted RBP7.84□□□□□ -1.15
GCFC2-209ENST00000486016 FAM214BQ7L5A3 538 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 PLD6Q8N2A8 252 aaKnown RBP7.84□□□□□ -1.15
GCFC2-209ENST00000486016 FAM181AQ8N9Y4 354 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 RNF214Q8ND24 703 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 GRIN3AQ8TCU5 1115 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 ASB16Q96NS5 453 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 SLC5A6Q9Y289 635 aa7.84□□□□□ -1.15
GCFC2-209ENST00000486016 GSTT1P30711 240 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 SRCIN1Q9C0H9 1055 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 MKNK2Q9HBH9 465 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 WWC3Q9ULE0 1092 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 PPM1HQ9ULR3 514 aa7.83□□□□□ -1.16
GCFC2-209ENST00000486016 RNGTTO60942 597 aaKnown RBP7.82□□□□□ -1.16
GCFC2-209ENST00000486016 OXCT1P55809 520 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 HNRNPUQ00839 825 aaKnown RBP eCLIP7.82□□□□□ -1.16
GCFC2-209ENST00000486016 BNIP3Q12983 259 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 STK11IPQ8N1F8 1099 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 NETO1Q8TDF5 533 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 MISP3Q96FF7 219 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 PLAGL2Q9UPG8 496 aa7.82□□□□□ -1.16
GCFC2-209ENST00000486016 BIN1O00499 593 aa7.81□□□□□ -1.16
GCFC2-209ENST00000486016 GIPC1O14908 333 aa7.81□□□□□ -1.16
GCFC2-209ENST00000486016 TPTE2Q6XPS3 522 aa7.81□□□□□ -1.16
GCFC2-209ENST00000486016 IVNS1ABPQ9Y6Y0 642 aa7.81□□□□□ -1.16
GCFC2-209ENST00000486016 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
GCFC2-209ENST00000486016 TRIM37O94972 964 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 MAPK8P45983 427 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 ALG1LQ6GMV1 187 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 UBE3DQ7Z6J8 389 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 ZSCAN29Q8IWY8 852 aaPredicted RBP7.8□□□□□ -1.16
GCFC2-209ENST00000486016 HEXIM2Q96MH2 286 aaKnown RBP7.8□□□□□ -1.16
GCFC2-209ENST00000486016 CEP44Q9C0F1 390 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 VAV3Q9UKW4 847 aa7.8□□□□□ -1.16
GCFC2-209ENST00000486016 CARMIL2Q6F5E8 1435 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 KRTAP9-7A8MTY7 169 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 FBXO24O75426 580 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 FARP2O94887 1054 aaPredicted RBP7.79□□□□□ -1.16
GCFC2-209ENST00000486016 CD8BP10966 210 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 PRKCQQ04759 706 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 ZNF792Q3KQV3 632 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 PPM1JQ5JR12 505 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 SCARA3Q6AZY7 606 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
GCFC2-209ENST00000486016 TNKS2Q9H2K2 1166 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
GCFC2-209ENST00000486016 FUT4P22083 530 aa7.78□□□□□ -1.16
GCFC2-209ENST00000486016 KCNA1Q09470 495 aa7.78□□□□□ -1.16
GCFC2-209ENST00000486016 PKN1Q16512 942 aa7.78□□□□□ -1.16
GCFC2-209ENST00000486016 TOP6BLQ8N6T0 577 aa7.78□□□□□ -1.16
GCFC2-209ENST00000486016 CEACAM5P06731 702 aa7.77□□□□□ -1.17
GCFC2-209ENST00000486016 P4HBP07237 508 aaKnown RBP7.77□□□□□ -1.17
GCFC2-209ENST00000486016 CD96P40200 585 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms