RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 PCDHA4Q9UN74 947 aa6.84□□□□□ -1.31
SPTLC3-206ENST00000485952 CILPO75339 1184 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 RPL6Q02878 288 aaKnown RBP6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 SOGA3Q5TF21 947 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 ACAD11Q709F0 780 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 NKD1Q969G9 470 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 RUSC1Q9BVN2 902 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 LRRC3Q9BY71 257 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 RNF208Q9H0X6 261 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 UBP1Q9NZI7 540 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 NCAPD3P42695 1498 aa6.83□□□□□ -1.32
SPTLC3-206ENST00000485952 SYNGAP1Q96PV0 1343 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 FAM221AA4D161 298 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 TLR3O15455 904 aaKnown RBP6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 STK10O94804 968 aaKnown RBP6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 CTSBP07858 339 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 LIG1P18858 919 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 SOX9P48436 509 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 KIF4BQ2VIQ3 1234 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 NUTM2GQ5VZR2 741 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 MPRIPQ6WCQ1 1025 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 HDXQ7Z353 690 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 NOP9Q86U38 636 aaKnown RBP6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 NACC1Q96RE7 527 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 CYP4F12Q9HCS2 524 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 GINM1Q9NU53 330 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 EFR3BQ9Y2G0 817 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 SNCAIPQ9Y6H5 919 aa6.82□□□□□ -1.32
SPTLC3-206ENST00000485952 MEGF11A6BM72 1044 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 ZNF862O60290 1169 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 AOC2O75106 756 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 DLGAP3O95886 979 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 MCM4P33991 863 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 CRKP46108 304 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 NASPP49321 788 aaPredicted RBP6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 PTPN11Q06124 597 aaPredicted RBP6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 SEZ6Q53EL9 994 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 PMFBP1Q8TBY8 1022 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 ELMO3Q96BJ8 720 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 WDR18Q9BV38 432 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 TMPRSS13Q9BYE2 586 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 USP21Q9UK80 565 aa6.81□□□□□ -1.32
SPTLC3-206ENST00000485952 WISP1O95388 367 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 APBA3O96018 575 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 CANXP27824 592 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 ZNF165P49910 485 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 NRG1Q02297 640 aaPredicted RBP6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 GRIK4Q16099 956 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 FDX2Q6P4F2 183 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 REC114Q7Z4M0 266 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 TMEM130Q8N3G9 435 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 WDR89Q96FK6 387 aaPredicted RBP6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 PIF1Q9H611 641 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 SUGCTQ9HAC7 445 aa6.8□□□□□ -1.32
SPTLC3-206ENST00000485952 ID3Q02535 119 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 AKAP4Q5JQC9 854 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 WIPI1Q5MNZ9 446 aaPredicted RBP6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 ANKRD34AQ69YU3 496 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 SHISA2Q6UWI4 295 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 LENG1Q96BZ8 264 aaPredicted RBP6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 PLPPR2Q96GM1 343 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 ZNF408Q9H9D4 720 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 PICK1Q9NRD5 415 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 STRIP2Q9ULQ0 834 aa6.79□□□□□ -1.32
SPTLC3-206ENST00000485952 DCDC2CA8MYV0 355 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 C9orf172C9J069 976 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 F8W735 103 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 RNF225M0QZC1 329 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 SSBP05455 408 aaKnown RBP eCLIP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 ETFBP38117 255 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 ZC3H12AQ5D1E8 599 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 LRFN4Q6PJG9 635 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 REXO1Q8N1G1 1221 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 C12orf50Q8NA57 414 aaPredicted RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 SMG8Q8ND04 991 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 CPLX3Q8WVH0 158 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 PUS7Q96PZ0 661 aaKnown RBP6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 CEP41Q9BYV8 373 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 AKTIPQ9H8T0 292 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 BRMS1Q9HCU9 246 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 AP4E1Q9UPM8 1137 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 TACC3Q9Y6A5 838 aa6.78□□□□□ -1.32
SPTLC3-206ENST00000485952 TLDC2A0PJX2 215 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 SELPP16109 830 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 ERVK-24P63145 666 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 PDE4BQ07343 736 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 MLECQ14165 292 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 INPP5AQ14642 412 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 NBPF6Q5VWK0 638 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 NBPF4Q96M43 638 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 FERD3LQ96RJ6 166 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 ATXN3LQ9H3M9 355 aa6.77□□□□□ -1.33
SPTLC3-206ENST00000485952 ZSWIM4Q9H7M6 989 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms