RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 AAMPQ13685 434 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 RASGRF1Q13972 1273 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 GRIK5Q16478 980 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 NKX2-3Q8TAU0 364 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 EAF2Q96CJ1 260 aaPredicted RBP14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 DBNDD2Q9BQY9 259 aa14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 CCDC8Q9H0W5 538 aaPredicted RBP14.68□□□□□ -0.06
HLA-DOA-204ENST00000485901 APBB1O00213 710 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 LDHBP07195 334 aaKnown RBP14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 ARID4AP29374 1257 aaPredicted RBP14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 SLC4A8Q2Y0W8 1093 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 TTC39AQ5SRH9 613 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 SPTY2D1Q68D10 685 aaPredicted RBP14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 AACSQ86V21 672 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 SPATA5Q8NB90 893 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 OTUD5Q96G74 571 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 ZNF341Q9BYN7 854 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 PTCH2Q9Y6C5 1203 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 SNCAIPQ9Y6H5 919 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 TRIOBPQ9H2D6 2365 aa14.67□□□□□ -0.06
HLA-DOA-204ENST00000485901 IRF6O14896 467 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 APOBEC3HQ6NTF7 200 aaKnown RBP14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 ANKRD23Q86SG2 305 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 FAM151AQ8WW52 585 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 ZNF512BQ96KM6 892 aaPredicted RBP14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 WRNIP1Q96S55 665 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 DCTPP1Q9H773 170 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 HMG20BQ9P0W2 317 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 ABCF2Q9UG63 623 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 ZNF112Q9UJU3 913 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 PCDHB15Q9Y5E8 787 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 MYH13Q9UKX3 1938 aa14.66□□□□□ -0.06
HLA-DOA-204ENST00000485901 AK9Q5TCS8 1911 aa14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 BTBD19C9JJ37 291 aa14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 CAP1Q01518 475 aa14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 C17orf99Q6UX52 265 aa14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 DBNLQ9UJU6 430 aaKnown RBP14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 KCNH4Q9UQ05 1017 aa14.65□□□□□ -0.06
HLA-DOA-204ENST00000485901 IFIT2P09913 472 aaKnown RBP14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 PRDX5P30044 214 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 MCAMP43121 646 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 FXR1P51114 621 aaKnown RBP eCLIP14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 NOL9Q5SY16 702 aaKnown RBP14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 CDAN1Q8IWY9 1227 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 SLF2Q8IX21 1173 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 LRRCC1Q9C099 1032 aa14.64□□□□□ -0.07
HLA-DOA-204ENST00000485901 DZIP1Q86YF9 867 aaKnown RBP14.63□□□□□ -0.07
HLA-DOA-204ENST00000485901 TLR7Q9NYK1 1049 aaKnown RBP14.63□□□□□ -0.07
HLA-DOA-204ENST00000485901 SRRDQ9UH36 339 aa14.63□□□□□ -0.07
HLA-DOA-204ENST00000485901 CXCL11O14625 94 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 IGSF3O75054 1194 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 PI16Q6UXB8 463 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 TBC1D9Q6ZT07 1266 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 ZKSCAN4Q969J2 545 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 FAM163AQ96GL9 167 aaPredicted RBP14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 BCL11AQ9H165 835 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 LRP2BPQ9P2M1 347 aa14.62□□□□□ -0.07
HLA-DOA-204ENST00000485901 LDHCP07864 332 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 GSTO1P78417 241 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 DIXDC1Q155Q3 683 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 TRIM47Q96LD4 638 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 SLC45A1Q9Y2W3 748 aa14.61□□□□□ -0.07
HLA-DOA-204ENST00000485901 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 GJB1P08034 283 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 GRK4P32298 578 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 ZAP70P43403 619 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 PSMC4P43686 418 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 GJA8P48165 433 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 MECOMQ03112 1051 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 HDAC1Q13547 482 aaPredicted RBP14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 FASTKD5Q7L8L6 764 aaKnown RBP14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 PARK7Q99497 189 aaKnown RBP14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 HTATIP2Q9BUP3 242 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 ADGRA2Q96PE1 1338 aa14.6□□□□□ -0.07
HLA-DOA-204ENST00000485901 MGAMO43451 1857 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 PDHXO00330 501 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 SMARCA5O60264 1052 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 CYP2E1P05181 493 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 CACNB3P54284 484 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 UBXN2AP68543 259 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 MAP3K10Q02779 954 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 RAET1EQ8TD07 263 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 RWDD1Q9H446 243 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 USP40Q9NVE5 1235 aa14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
HLA-DOA-204ENST00000485901 ENTPD3O75355 529 aa14.58□□□□□ -0.08
HLA-DOA-204ENST00000485901 INPP5BP32019 993 aa14.58□□□□□ -0.08
HLA-DOA-204ENST00000485901 TTF1Q15361 905 aaPredicted RBP14.58□□□□□ -0.08
HLA-DOA-204ENST00000485901 CDC42EP5Q6NZY7 148 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms