RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 RAXQ9Y2V3 346 aa5.75□□□□□ -1.49
RTN4-213ENST00000485749 EXOC5O00471 708 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 U2SURPO15042 1029 aaKnown RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 DHX15O43143 795 aaKnown RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 COBLO75128 1261 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 KIF4AO95239 1232 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 SSBP05455 408 aaKnown RBP eCLIP5.74□□□□□ -1.49
RTN4-213ENST00000485749 GRNP28799 593 aaKnown RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 GSTT1P30711 240 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 FAM117BQ6P1L5 589 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 INTS5Q6P9B9 1019 aaKnown RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 ZNF438Q7Z4V0 828 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 GALNT12Q8IXK2 581 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 CXorf38Q8TB03 319 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 GPATCH3Q96I76 525 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 SPON2Q9BUD6 331 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 STOML1Q9UBI4 398 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 FAN1Q9Y2M0 1017 aa5.74□□□□□ -1.49
RTN4-213ENST00000485749 NOP58Q9Y2X3 529 aaKnown RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 COL17A1Q9UMD9 1497 aaPredicted RBP5.74□□□□□ -1.49
RTN4-213ENST00000485749 A6NHS1 94 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 PHACTR2O75167 634 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 SMNDC1O75940 238 aaKnown RBP eCLIP5.73□□□□□ -1.492e-15■■■□□ 16
RTN4-213ENST00000485749 IGLV1-40P01703 118 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 CNGB1Q14028 1251 aaPredicted RBP5.73□□□□□ -1.49
RTN4-213ENST00000485749 AXDND1Q5T1B0 1012 aaPredicted RBP5.73□□□□□ -1.49
RTN4-213ENST00000485749 USPL1Q5W0Q7 1092 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 Q6ZS46 218 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 NLRP13Q86W25 1043 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 RELL1Q8IUW5 271 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 KIAA0825Q8IV33 1275 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 EVI5LQ96CN4 794 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 BCO2Q9BYV7 579 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 MAF1Q9H063 256 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 TMX4Q9H1E5 349 aaPredicted RBP5.73□□□□□ -1.49
RTN4-213ENST00000485749 KBTBD4Q9NVX7 518 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 CHPF2Q9P2E5 772 aa5.73□□□□□ -1.49
RTN4-213ENST00000485749 FOXD3Q9UJU5 478 aaPredicted RBP5.73□□□□□ -1.49
RTN4-213ENST00000485749 MRPL42Q9Y6G3 142 aaKnown RBP5.73□□□□□ -1.49
RTN4-213ENST00000485749 TTC36A6NLP5 189 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 UBAP1LF5GYI3 381 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 MMP20O60882 483 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 SSTR4P31391 388 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 SOX9P48436 509 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 CD97P48960 835 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 KIAA0319Q5VV43 1072 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 NXPE4Q6UWF7 544 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 CLEC4GQ6UXB4 293 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 PI16Q6UXB8 463 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 CCDC146Q8IYE0 955 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 NSUN5Q96P11 429 aaKnown RBP5.72□□□□□ -1.49
RTN4-213ENST00000485749 ZNF408Q9H9D4 720 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 ELP3Q9H9T3 547 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 COPRSQ9NQ92 184 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 KCNQ5Q9NR82 932 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 PPM1HQ9ULR3 514 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 TRAK1Q9UPV9 953 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 USP20Q9Y2K6 914 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 PRKAB1Q9Y478 270 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 KCNMB2Q9Y691 235 aa5.72□□□□□ -1.49
RTN4-213ENST00000485749 J3QW42 95 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 KLF4O43474 513 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 YBX3P16989 372 aaKnown RBP eCLIP5.71□□□□□ -1.5
RTN4-213ENST00000485749 HYAL2Q12891 473 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 BIRC2Q13490 618 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 RAB33AQ14088 237 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 SETDB1Q15047 1291 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.71□□□□□ -1.5
RTN4-213ENST00000485749 AMOTL1Q8IY63 956 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 SDR16C5Q8N3Y7 309 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 NT5C1AQ9BXI3 368 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 CHMP4BQ9H444 224 aaKnown RBP5.71□□□□□ -1.5
RTN4-213ENST00000485749 NPHS2Q9NP85 383 aa5.71□□□□□ -1.5
RTN4-213ENST00000485749 GADD45BO75293 160 aaPredicted RBP5.7□□□□□ -1.5
RTN4-213ENST00000485749 ALX3O95076 343 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 EIF4A3P38919 411 aaKnown RBP5.7□□□□□ -1.5
RTN4-213ENST00000485749 TRIP4Q15650 581 aaPredicted RBP5.7□□□□□ -1.5
RTN4-213ENST00000485749 ZNF280DQ6N043 979 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 KLHL23Q8NBE8 558 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 TMEM74Q96NL1 305 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 ZFYVE1Q9HBF4 777 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 GABBR1Q9UBS5 961 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 ADAMTS1Q9UHI8 967 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 RPS6KL1Q9Y6S9 549 aa5.7□□□□□ -1.5
RTN4-213ENST00000485749 KIAA1324LA8MWY0 1029 aaPredicted RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 GOLIM4O00461 696 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 CD68P34810 354 aaPredicted RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 COPB2P35606 906 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 NASPP49321 788 aaPredicted RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 GRM2Q14416 872 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 C4orf46Q504U0 113 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 TTC39BQ5VTQ0 682 aaPredicted RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 ANKS3Q6ZW76 656 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 ANP32BQ92688 251 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 UTP4Q969X6 686 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 RNPC3Q96LT9 517 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 SRPK1Q96SB4 655 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 TRIM55Q9BYV6 548 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms