RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 IL17RAQ96F46 866 aa18.95■□□□□ 0.62
APOE-205ENST00000485628 MYH1P12882 1939 aa18.95■□□□□ 0.62
APOE-205ENST00000485628 ATRNL1Q5VV63 1379 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 MYO1BO43795 1136 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 CTR9Q6PD62 1173 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 SH3BP5LQ7L8J4 393 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 ZFPM1Q8IX07 1006 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 OSBPL5Q9H0X9 879 aaPredicted RBP18.94■□□□□ 0.62
APOE-205ENST00000485628 NAV1Q8NEY1 1877 aa18.94■□□□□ 0.62
APOE-205ENST00000485628 SIPA1L1O43166 1804 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 CACNB3P54284 484 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 PNMA8AQ86V59 439 aaPredicted RBP18.93■□□□□ 0.62
APOE-205ENST00000485628 METTL16Q86W50 562 aaKnown RBP18.93■□□□□ 0.62
APOE-205ENST00000485628 FAM151AQ8WW52 585 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 RRAGCQ9HB90 399 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 NMRK2Q9NPI5 230 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 LAMA4Q16363 1823 aa18.93■□□□□ 0.62
APOE-205ENST00000485628 TSGA10IPQ3SY00 556 aa18.92■□□□□ 0.62
APOE-205ENST00000485628 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
APOE-205ENST00000485628 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
APOE-205ENST00000485628 TEPSINQ96N21 525 aa18.92■□□□□ 0.62
APOE-205ENST00000485628 ANAPC4Q9UJX5 808 aa18.92■□□□□ 0.62
APOE-205ENST00000485628 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
APOE-205ENST00000485628 U3KPZ7 1027 aaPredicted RBP18.92■□□□□ 0.62
APOE-205ENST00000485628 FGRP09769 529 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 HSPA4P34932 840 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 USP5P45974 858 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 MAP3K10Q02779 954 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 C12orf60Q5U649 245 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 ANGEL2Q5VTE6 544 aaKnown RBP18.91■□□□□ 0.62
APOE-205ENST00000485628 NACAP1Q9BZK3 213 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 NBPF3Q9H094 633 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 LAMB1P07942 1786 aa18.91■□□□□ 0.62
APOE-205ENST00000485628 DDTLA6NHG4 134 aaPredicted RBP18.9■□□□□ 0.62
APOE-205ENST00000485628 USP17L12C9JPN9 530 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 USP17L21D6R901 530 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 GABPAQ06546 454 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 APOBEC3FQ8IUX4 373 aaKnown RBP18.9■□□□□ 0.62
APOE-205ENST00000485628 GGA3Q9NZ52 723 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 CTNNA3Q9UI47 895 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 TACC3Q9Y6A5 838 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 ROBO3Q96MS0 1386 aa18.9■□□□□ 0.62
APOE-205ENST00000485628 TCP10L2B9ZVM9 353 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 CYP21A2P08686 494 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 POTEIP0CG38 1075 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 POTEJP0CG39 1038 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 PLCD1P51178 756 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 EVX2Q03828 476 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 TNFAIP1Q13829 316 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 RASA3Q14644 834 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 NAPBQ9H115 298 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.61
APOE-205ENST00000485628 ARPP21Q9UBL0 812 aaPredicted RBP18.89■□□□□ 0.61
APOE-205ENST00000485628 TAOK2Q9UL54 1235 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 PALD1Q9ULE6 856 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 PPP2R3BQ9Y5P8 575 aa18.89■□□□□ 0.61
APOE-205ENST00000485628 APPP05067 770 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 RBM25P49756 843 aaKnown RBP18.88■□□□□ 0.61
APOE-205ENST00000485628 TCP10Q12799 353 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 PICALMQ13492 652 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 DEFB129Q9H1M3 183 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 EHD4Q9H223 541 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 MCM9Q9NXL9 1143 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 TAF6LQ9Y6J9 622 aa18.88■□□□□ 0.61
APOE-205ENST00000485628 CYP2D7A0A087X1C5 515 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 KIF3CO14782 793 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 SLC27A2O14975 620 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 CYP2D6P10635 497 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 PPARAQ07869 468 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 CREB3L3Q68CJ9 461 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 CDAN1Q8IWY9 1227 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 RASEFQ8IZ41 740 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 TMEM39BQ9GZU3 492 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 VEZTQ9HBM0 779 aa18.87■□□□□ 0.61
APOE-205ENST00000485628 TBC1D12O60347 775 aa18.86■□□□□ 0.61
APOE-205ENST00000485628 TDO2P48775 406 aa18.86■□□□□ 0.61
APOE-205ENST00000485628 TNNI2P48788 182 aa18.86■□□□□ 0.61
APOE-205ENST00000485628 LDHDQ86WU2 507 aa18.86■□□□□ 0.61
APOE-205ENST00000485628 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
APOE-205ENST00000485628 SAP30BPQ9UHR5 308 aaKnown RBP18.86■□□□□ 0.61
APOE-205ENST00000485628 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
APOE-205ENST00000485628 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
APOE-205ENST00000485628 FOXP4Q8IVH2 680 aaPredicted RBP18.85■□□□□ 0.61
APOE-205ENST00000485628 DCPSQ96C86 337 aaKnown RBP18.85■□□□□ 0.61
APOE-205ENST00000485628 DDRGK1Q96HY6 314 aa18.85■□□□□ 0.61
APOE-205ENST00000485628 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
APOE-205ENST00000485628 KIF2CQ99661 725 aa18.85■□□□□ 0.61
APOE-205ENST00000485628 DNAJC18Q9H819 358 aa18.85■□□□□ 0.61
APOE-205ENST00000485628 SCAF8Q9UPN6 1271 aaKnown RBP18.85■□□□□ 0.61
APOE-205ENST00000485628 ZNF213O14771 459 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 ANAPC15P60006 121 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 IMMTQ16891 758 aaKnown RBP18.84■□□□□ 0.61
APOE-205ENST00000485628 STOX1Q6ZVD7 989 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 C16orf86Q6ZW13 317 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 TBC1D10CQ8IV04 446 aa18.84■□□□□ 0.61
APOE-205ENST00000485628 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 264.9 ms