RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RNF181Q9P0P0 153 aa17.3■□□□□ 0.36
LRIF1-202ENST00000485275 USP5P45974 858 aa17.29■□□□□ 0.36
LRIF1-202ENST00000485275 GMPSP49915 693 aaPredicted RBP17.29■□□□□ 0.36
LRIF1-202ENST00000485275 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
LRIF1-202ENST00000485275 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
LRIF1-202ENST00000485275 PPARAQ07869 468 aa17.29■□□□□ 0.36
LRIF1-202ENST00000485275 TNIP1Q15025 636 aa17.29■□□□□ 0.36
LRIF1-202ENST00000485275 USP40Q9NVE5 1235 aa17.29■□□□□ 0.36
LRIF1-202ENST00000485275 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
LRIF1-202ENST00000485275 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 PLCG2P16885 1265 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 SLC4A3P48751 1232 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 GPR162Q16538 588 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 CERS3Q8IU89 383 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 STK11IPQ8N1F8 1099 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 ZBED3Q96IU2 234 aaPredicted RBP17.28■□□□□ 0.36
LRIF1-202ENST00000485275 MCM9Q9NXL9 1143 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 MINDY4BA8MYZ0 360 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 RUFY3Q7L099 469 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 NEK1Q96PY6 1258 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 TDRD3Q9H7E2 651 aaKnown RBP17.28■□□□□ 0.36
LRIF1-202ENST00000485275 SAP30BPQ9UHR5 308 aaKnown RBP17.28■□□□□ 0.36
LRIF1-202ENST00000485275 ANAPC4Q9UJX5 808 aa17.28■□□□□ 0.36
LRIF1-202ENST00000485275 RPS6KB1P23443 525 aa17.27■□□□□ 0.35
LRIF1-202ENST00000485275 ZNF280AP59817 542 aaPredicted RBP17.27■□□□□ 0.35
LRIF1-202ENST00000485275 PICALMQ13492 652 aa17.27■□□□□ 0.35
LRIF1-202ENST00000485275 KRT32Q14532 448 aa17.27■□□□□ 0.35
LRIF1-202ENST00000485275 ZFPM1Q8IX07 1006 aa17.27■□□□□ 0.35
LRIF1-202ENST00000485275 MB21D2Q8IYB1 491 aaPredicted RBP17.27■□□□□ 0.35
LRIF1-202ENST00000485275 SNX21Q969T3 373 aa17.27■□□□□ 0.35
LRIF1-202ENST00000485275 ARPP21Q9UBL0 812 aaPredicted RBP17.27■□□□□ 0.35
LRIF1-202ENST00000485275 ROBO3Q96MS0 1386 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 RPS12P25398 132 aaKnown RBP17.26■□□□□ 0.35
LRIF1-202ENST00000485275 PLCD1P51178 756 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 ANTXR2P58335 489 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 SBK1Q52WX2 424 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 C12orf60Q5U649 245 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 MICALL2Q8IY33 904 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
LRIF1-202ENST00000485275 FAM198AQ9UFP1 575 aa17.26■□□□□ 0.35
LRIF1-202ENST00000485275 AKNAD1Q5T1N1 836 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 BLOC1S2Q6QNY1 142 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 CHST3Q7LGC8 479 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 OGFOD1Q8N543 542 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 MTMR14Q8NCE2 650 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 STAG1Q8WVM7 1258 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 MYOZ2Q9NPC6 264 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 HDAC9Q9UKV0 1011 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 CYP46A1Q9Y6A2 500 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 CLRN2A0PK11 232 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 AK2P54819 239 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 DPF2Q92785 391 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
LRIF1-202ENST00000485275 IDI2Q9BXS1 227 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 LRRC2Q9BYS8 371 aa17.25■□□□□ 0.35
LRIF1-202ENST00000485275 OSBPL5Q9H0X9 879 aaPredicted RBP17.25■□□□□ 0.35
LRIF1-202ENST00000485275 B4E1Z4 1266 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 WNT10BO00744 389 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 SLURP2P0DP57 97 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 PSMA5P28066 241 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 EXOSC10Q01780 885 aaKnown RBP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 TOB2Q14106 344 aaPredicted RBP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 DLGAP5Q15398 846 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 CYB5R4Q7L1T6 521 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 SAMD7Q7Z3H4 446 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 GPC2Q8N158 579 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 DYNLL2Q96FJ2 89 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
LRIF1-202ENST00000485275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 ASTN2O75129 1339 aaPredicted RBP17.24■□□□□ 0.35
LRIF1-202ENST00000485275 PRDM1O75626 825 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 FGRP09769 529 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 SH3BP5LQ7L8J4 393 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 SLC44A5Q8NCS7 719 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 GPHNQ9NQX3 736 aaPredicted RBP17.23■□□□□ 0.35
LRIF1-202ENST00000485275 PDRG1Q9NUG6 133 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
LRIF1-202ENST00000485275 ST18O60284 1047 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 TCP10Q12799 353 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 NCOA7Q8NI08 942 aa17.23■□□□□ 0.35
LRIF1-202ENST00000485275 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
LRIF1-202ENST00000485275 CNTNAP1P78357 1384 aa17.22■□□□□ 0.35
LRIF1-202ENST00000485275 LARGE1O95461 756 aa17.22■□□□□ 0.35
LRIF1-202ENST00000485275 MFSD6Q6ZSS7 791 aa17.22■□□□□ 0.35
LRIF1-202ENST00000485275 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
LRIF1-202ENST00000485275 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
LRIF1-202ENST00000485275 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
LRIF1-202ENST00000485275 DDTLA6NHG4 134 aaPredicted RBP17.21■□□□□ 0.35
LRIF1-202ENST00000485275 K7ELQ4 463 aaPredicted RBP17.21■□□□□ 0.35
LRIF1-202ENST00000485275 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
LRIF1-202ENST00000485275 RBM26Q5T8P6 1007 aaKnown RBP17.21■□□□□ 0.35
LRIF1-202ENST00000485275 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
LRIF1-202ENST00000485275 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
LRIF1-202ENST00000485275 MYH8P13535 1937 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms