RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 DCAF15Q66K64 600 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 SERPINA10Q9UK55 444 aa13.04□□□□□ -0.32
EXOSC1-210ENST00000485122 IL1R1P14778 569 aa13.03□□□□□ -0.32
EXOSC1-210ENST00000485122 CCL14Q16627 93 aa13.03□□□□□ -0.32
EXOSC1-210ENST00000485122 CXCL11O14625 94 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 TLL1O43897 1013 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 GRIK5Q16478 980 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 MFSD14BQ5SR56 506 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 MYD88Q99836 296 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 CACNA1GO43497 2377 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.33
EXOSC1-210ENST00000485122 ZNF318Q5VUA4 2279 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 ERC2O15083 957 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 HSP90B1P14625 803 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 ZKSCAN1P17029 563 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 CHRNDQ07001 517 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 NOL9Q5SY16 702 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 CCDC129Q6ZRS4 1044 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 FASTKD5Q7L8L6 764 aaKnown RBP13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 ZNF112Q9UJU3 913 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 SLC45A1Q9Y2W3 748 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 RPAP1Q9BWH6 1393 aaPredicted RBP13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
EXOSC1-210ENST00000485122 WDFY4Q6ZS81 3184 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 PEX10O60683 326 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 TAF5LO75529 589 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 EIF4G2P78344 907 aaKnown RBP eCLIP13□□□□□ -0.33
EXOSC1-210ENST00000485122 TREML2Q5T2D2 321 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 SLC39A5Q6ZMH5 540 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
EXOSC1-210ENST00000485122 ZHX2Q9Y6X8 837 aa13□□□□□ -0.33
EXOSC1-210ENST00000485122 DOCK1Q14185 1865 aa12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 IGHMBP2P38935 993 aaKnown RBP12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 GJC2Q5T442 439 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 CCDC84Q86UT8 332 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 HOOK2Q96ED9 719 aa12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 LOC285556D6RIA3 1793 aa12.99□□□□□ -0.33
EXOSC1-210ENST00000485122 CFAP54Q96N23 3096 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 DOCK2Q92608 1830 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 DNM1LO00429 736 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 FAM83AQ86UY5 434 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 NKX2-4Q9H2Z4 354 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-210ENST00000485122 TRIM75PA6NK02 468 aa12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 FPGSQ05932 587 aa12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 CWC25Q9NXE8 425 aaPredicted RBP12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 AFG3L2Q9Y4W6 797 aa12.97□□□□□ -0.33
EXOSC1-210ENST00000485122 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 PTPRAP18433 802 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 SNX17Q15036 470 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 HDGFL1Q5TGJ6 251 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 C15orf52Q6ZUT6 534 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 DDX20Q9UHI6 824 aaKnown RBP12.96□□□□□ -0.33
EXOSC1-210ENST00000485122 USP34Q70CQ2 3546 aa12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 LPAR1Q92633 364 aa12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 KCNH6Q9H252 994 aa12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 CHD9Q3L8U1 2897 aa12.95□□□□□ -0.34
EXOSC1-210ENST00000485122 ITGA6P23229 1130 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 CNGA1P29973 690 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 TLE2Q04725 743 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 TCP10Q12799 353 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 SCYL3Q8IZE3 742 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 SOCS4Q8WXH5 440 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 FERMT2Q96AC1 680 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 YBX2Q9Y2T7 364 aaKnown RBP12.94□□□□□ -0.34
EXOSC1-210ENST00000485122 GFRA3O60609 400 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 RAG1P15918 1043 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 KRT40Q6A162 431 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 PHAXQ9H814 394 aaKnown RBP12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 CHD7Q9P2D1 2997 aa12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 DBF4Q9UBU7 674 aaPredicted RBP12.93□□□□□ -0.34
EXOSC1-210ENST00000485122 RFXAPO00287 272 aa12.92□□□□□ -0.34
EXOSC1-210ENST00000485122 CLTBP09497 229 aa12.92□□□□□ -0.34
EXOSC1-210ENST00000485122 GCLCP48506 637 aaPredicted RBP12.92□□□□□ -0.34
EXOSC1-210ENST00000485122 GOLGA2Q08379 1002 aa12.92□□□□□ -0.34
EXOSC1-210ENST00000485122 APOBEC3HQ6NTF7 200 aaKnown RBP12.92□□□□□ -0.34
EXOSC1-210ENST00000485122 USP6NLQ92738 828 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms