RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 WRNIP1Q96S55 665 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 CSRNP1Q96S65 589 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 ZNF341Q9BYN7 854 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 ELP3Q9H9T3 547 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 ECHDC1Q9NTX5 307 aa23.24■■□□□ 1.31
SNX17-206ENST00000484886 HDAC1Q13547 482 aaPredicted RBP23.23■■□□□ 1.31
SNX17-206ENST00000484886 SPRYD7Q5W111 196 aa23.23■■□□□ 1.31
SNX17-206ENST00000484886 MIGA1Q8NAN2 632 aa23.23■■□□□ 1.31
SNX17-206ENST00000484886 EDC3Q96F86 508 aaKnown RBP23.23■■□□□ 1.31
SNX17-206ENST00000484886 HAUS7Q99871 368 aa23.23■■□□□ 1.31
SNX17-206ENST00000484886 VGLL4Q14135 290 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 SLC9C2Q5TAH2 1124 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 ANKRD45Q5TZF3 282 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 REM2Q8IYK8 340 aaPredicted RBP23.22■■□□□ 1.31
SNX17-206ENST00000484886 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.22■■□□□ 1.31
SNX17-206ENST00000484886 GCC1Q96CN9 775 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 WNK4Q96J92 1243 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 RWDD1Q9H446 243 aaPredicted RBP23.22■■□□□ 1.31
SNX17-206ENST00000484886 TSKSQ9UJT2 592 aa23.22■■□□□ 1.31
SNX17-206ENST00000484886 CA12O43570 354 aa23.21■■□□□ 1.31
SNX17-206ENST00000484886 PPP4CP60510 307 aa23.21■■□□□ 1.31
SNX17-206ENST00000484886 DYNLL1P63167 89 aaKnown RBP23.21■■□□□ 1.31
SNX17-206ENST00000484886 TSHZ3Q63HK5 1081 aa23.21■■□□□ 1.31
SNX17-206ENST00000484886 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.21■■□□□ 1.31
SNX17-206ENST00000484886 DDTLA6NHG4 134 aaPredicted RBP23.2■■□□□ 1.3
SNX17-206ENST00000484886 PDE6AP16499 860 aa23.2■■□□□ 1.3
SNX17-206ENST00000484886 TMED8Q6PL24 325 aaPredicted RBP23.2■■□□□ 1.3
SNX17-206ENST00000484886 TGFBRAP1Q8WUH2 860 aa23.2■■□□□ 1.3
SNX17-206ENST00000484886 OPTNQ96CV9 577 aa23.2■■□□□ 1.3
SNX17-206ENST00000484886 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNX17-206ENST00000484886 OSBPL5Q9H0X9 879 aaPredicted RBP23.2■■□□□ 1.3
SNX17-206ENST00000484886 NPM3O75607 178 aaKnown RBP23.19■■□□□ 1.3
SNX17-206ENST00000484886 ZBTB48P10074 688 aaPredicted RBP23.19■■□□□ 1.3
SNX17-206ENST00000484886 LBX1P52954 281 aa23.19■■□□□ 1.3
SNX17-206ENST00000484886 SREBF2Q12772 1141 aa23.19■■□□□ 1.3
SNX17-206ENST00000484886 SH3BP5LQ7L8J4 393 aa23.19■■□□□ 1.3
SNX17-206ENST00000484886 CERS3Q8IU89 383 aa23.19■■□□□ 1.3
SNX17-206ENST00000484886 MAPKAPK5Q8IW41 473 aa23.19■■□□□ 1.3
SNX17-206ENST00000484886 ZKSCAN4Q969J2 545 aaPredicted RBP23.19■■□□□ 1.3
SNX17-206ENST00000484886 ZNF532Q9HCE3 1301 aa23.18■■□□□ 1.3
SNX17-206ENST00000484886 HSPA8P11142 646 aaKnown RBP23.18■■□□□ 1.3
SNX17-206ENST00000484886 MAGEB6P1A0A0J9YX57 407 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 MANSC4A6NHS7 340 aaPredicted RBP23.17■■□□□ 1.3
SNX17-206ENST00000484886 TRPA1O75762 1119 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 INPP5BP32019 993 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 USP5P45974 858 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 OTUD7AQ8TE49 926 aaPredicted RBP23.17■■□□□ 1.3
SNX17-206ENST00000484886 OTUD5Q96G74 571 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 CDK5RAP2Q96SN8 1893 aa23.17■■□□□ 1.3
SNX17-206ENST00000484886 FLT1P17948 1338 aa23.16■■□□□ 1.3
SNX17-206ENST00000484886 ERC2O15083 957 aa23.16■■□□□ 1.3
SNX17-206ENST00000484886 CNKSR2Q8WXI2 1034 aa23.16■■□□□ 1.3
SNX17-206ENST00000484886 RNF186Q9NXI6 227 aa23.16■■□□□ 1.3
SNX17-206ENST00000484886 SNCAIPQ9Y6H5 919 aa23.16■■□□□ 1.3
SNX17-206ENST00000484886 ATRNL1Q5VV63 1379 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 TTC41PQ6P2S7 1318 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 MX1P20591 662 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 GJA5P36382 358 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 B4GALNT3Q6L9W6 998 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 ZSCAN25Q6NSZ9 544 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
SNX17-206ENST00000484886 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
SNX17-206ENST00000484886 COL2A1P02458 1487 aaPredicted RBP23.15■■□□□ 1.3
SNX17-206ENST00000484886 FOCADQ5VW36 1801 aa23.15■■□□□ 1.3
SNX17-206ENST00000484886 ERO1BQ86YB8 467 aa23.14■■□□□ 1.29
SNX17-206ENST00000484886 TRIM34Q9BYJ4 488 aa23.14■■□□□ 1.29
SNX17-206ENST00000484886 DHX36Q9H2U1 1008 aaKnown RBP23.14■■□□□ 1.29
SNX17-206ENST00000484886 SAGE1Q9NXZ1 904 aa23.14■■□□□ 1.29
SNX17-206ENST00000484886 ZNF112Q9UJU3 913 aa23.14■■□□□ 1.29
SNX17-206ENST00000484886 MYH7P12883 1935 aa23.14■■□□□ 1.29
SNX17-206ENST00000484886 FAM196BA6NMK8 535 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 IGHDP01880 384 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 SLURP2P0DP57 97 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 ADD2P35612 726 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 TM4SF4P48230 202 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 SLC4A8Q2Y0W8 1093 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 CRNKL1Q9BZJ0 848 aaKnown RBP23.13■■□□□ 1.29
SNX17-206ENST00000484886 PRDM10Q9NQV6 1147 aa23.13■■□□□ 1.29
SNX17-206ENST00000484886 TCRBV5S4A2TA0A5A2 114 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 SPDYE5A6NIY4 337 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 GLRX3O76003 335 aaKnown RBP23.12■■□□□ 1.29
SNX17-206ENST00000484886 INHBEP58166 350 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 COL13A1Q5TAT6 717 aaPredicted RBP23.12■■□□□ 1.29
SNX17-206ENST00000484886 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
SNX17-206ENST00000484886 LNPKQ9C0E8 428 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 PICK1Q9NRD5 415 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 PALD1Q9ULE6 856 aa23.12■■□□□ 1.29
SNX17-206ENST00000484886 HLA-DOAP06340 250 aa23.11■■□□□ 1.29
SNX17-206ENST00000484886 GTF2A2P52657 109 aa23.11■■□□□ 1.29
SNX17-206ENST00000484886 SLFNL1Q499Z3 407 aa23.11■■□□□ 1.29
SNX17-206ENST00000484886 RIOK1Q9BRS2 568 aaKnown RBP23.11■■□□□ 1.29
SNX17-206ENST00000484886 PI4KBQ9UBF8 816 aa23.11■■□□□ 1.29
SNX17-206ENST00000484886 PHF20L1A8MW92 1017 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 MBD4O95243 580 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 PPIL2Q13356 520 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 NOL9Q5SY16 702 aaKnown RBP23.1■■□□□ 1.29
SNX17-206ENST00000484886 SMC5Q8IY18 1101 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 SCYL3Q8IZE3 742 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 LCORLQ8N3X6 602 aa23.1■■□□□ 1.29
SNX17-206ENST00000484886 KBTBD3Q8NAB2 608 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms